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Report for CCDS14969.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14969.1 Public Mus musculus 1 Aox3 23 108 98 CCDS HistoryNCBI Gene:71724Re-query CCDS DB by CCDS ID:14969.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14969.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000040999.13 ENSMUSP00000049391.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000040999.13Link to Ensembl Protein Viewer:ENSMUSP00000049391.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000040999Re-query CCDS DB by Protein ID:ENSMUSP00000049391
Original member Current member NCBI NM_023617.2 NP_076106.2 Accepted alive Link to Nucleotide Sequence:NM_023617.2Link to Protein Sequence:NP_076106.2Re-query CCDS DB by Nucleotide ID:NM_023617Re-query CCDS DB by Protein ID:NP_076106Link to BLAST:NP_076106.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_076106.2 1335 G3X982 1335 100% 0 0

Chromosomal Locations for CCDS 14969.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 58113259 58113312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58114871 58114928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58118598 58118694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58119481 58119589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58120978 58121104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58125018 58125079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58127627 58127707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58138216 58138296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58141351 58141495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58142670 58142762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58146424 58146575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58147194 58147287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58150295 58150404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58152554 58152738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58153021 58153183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58153480 58153572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58158201 58158370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58158905 58159019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58159637 58159759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58163349 58163445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58165837 58165961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58167603 58167736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58169778 58169865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58170657 58170743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58171742 58171933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58172121 58172348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58176474 58176569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58177519 58177647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58179317 58179391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58180606 58180658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58183466 58183580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58186277 58186342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58188335 58188523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58194626 58194793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 58200170 58200223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4008 nt):
ATGTCTCCTTCTAAGGAGTCAGATGAGCTTATTTTCTTTGTGAATGGAAAAAAGGTCACCGAGAGGAATG
CAGACCCTGAGGTTAATTTATTGTTCTACTTGAGAAAAGTCATCCGACTCACAGGGACAAAGTATGGCTG
TGGAGGAGGTGACTGTGGCGCCTGCACAGTGATGATCTCAAGATACGACCCCATCTCCAAAAGGATCAGT
CATTTCTCTGCCACTGCCTGCCTGGTTCCCATCTGCTCTCTCCATGGGGCTGCTGTCACTACAGTAGAAG
GCATAGGAAGCACCAAAACCAGGATACACCCTGTCCAGGAAAGGATTGCCAAAGGCCATGGTACCCAGTG
TGGGTTCTGCACTCCCGGGATGGTGATGAGCATCTATACTCTCCTGAGGAACCACCCAGAGCCCTCCACA
GAACAGATAATGGAAACCCTGGGCGGGAATCTATGCCGCTGCACTGGATACAGGCCCATTGTGGAGAGTG
CGAAAAGTTTCTGCCCGAGTTCAACTTGCTGCCAGATGAATGGGGAAGGGAAATGTTGCTTGGATGAAGA
AAAAAACGAGCCTGAGAGAAAAAACAGTGTTTGCACCAAGTTGTATGAAAAAAAAGAATTTCAGCCCTTG
GATCCAACTCAGGAGCTTATATTTCCACCTGAGCTGATGAGGATGGCCGAGGAGTCCCAAAATACAGTTC
TGACTTTTCGTGGGGAAAGGACTACCTGGATTGCCCCAGGAACCCTAAATGACCTTCTGGAACTGAAAAT
GAAGCATCCCAGCGCTCCACTTGTGATTGGCAACACCTATCTGGGGCTTCATATGAAGTTCACAGACGTA
TCTTATCCAATTATCATCTCTCCTGCAAGGATCTTAGAATTATTTGTGGTGACTAATACAAAGCAAGGGC
TGACACTGGGCGCAGGCCTCAGCCTGACCCAGGTGAAGAACGTCTTGTCTGACGTGGTCTCCAGACTCCC
TAAGGAGAAGACGCAGATATACTGTGCTCTCCTGAAGCAGCTGAAGACCCTGGCTGGGCAGCAGATCAGG
AATGTGGCCTCCTTAGGTGGTCATATTATCAGTAGACTGCCGACCTCTGACCTCAACCCTATTTTGGGCA
TAGGCAATTGCATCCTCAATGTTGCCTCAACAGAAGGAATACAGCAAATCCCTCTGAATGATCATTTTCT
CGCTGGAGTTCCAGATGCAATCCTGAAGCCAGAGCAAGTGCTCATCTCCGTTTTTGTGCCACGCTCCAGC
AAGTGGGAGTTTGTATCAGCCTTCAGACAGGCCCCTCGTCAGCAAAACGCGTTTGCAACAGTGAATGCTG
GAATGAAAGTCGTTTTCAAGGAGGACACAAACACCATTACAGACTTGGGGATCTTATATGGAGGGATTGG
TGCCACCGTAATCAGCGCAGATAAGTCCTGCCGGCAGCTGATTGGAAGGTGCTGGGATGAAGAAATGCTG
GATGATGCTGGCAAGATGATTTGTGAGGAAGTCTCCCTCCTGATGGCAGCCCCTGGAGGGATGGAGGAAT
ACCGAAAGACTCTTGCCATCAGTTTCCTCTTCATGTTTTACTTAGACGTGTTGAAGCAGTTAAAGACGAG
GGACCCCCACAAGTACCCTGACATCTCACAGAAACTCCTACACATTCTGGAAGACTTCCCTTTAACCATG
CCTTATGGGATGCAGTCATTTCAGGATGTAGACTTCCAACAGCCTCTGCAAGACCCAATCGGACGTCCCA
TCATGCATCAGTCTGGCATTAAACACGCCACAGGAGAGGCAGTATTTTGTGATGATATGTCTGTGTTGCC
TGGGGAACTCTTCTTGGCAGTGGTAACCAGCAGCAAGTCACATGCTAAAATCATCTCTCTTGATGCCTCC
GAGGCCTTGGCGTCACTTGGTGTGGTTGATGTGGTAACAGCTCGAGATGTGCCTGGTGACAATGGCAGAG
AAGAGGAAAGCCTATATGCACAGGATGAGGTGATCTGCGTGGGTCAAATTGTGTGTGCTGTGGCCGCTGA
CTCTTATGCTCATGCCCAGCAGGCCGCAAAAAAAGTGAAGATTGTCTATCAAGACATAGAGCCCATGATT
GTGACAGTGCAGGATGCACTGCAATATGAATCATTCATTGGACCTGAAAGAAAACTAGAACAAGGAAATG
TTGAGGAAGCATTTCAATGTGCCGATCAAATCCTCGAAGGGGAGGTGCACTTGGGAGGCCAGGAGCATTT
TTACATGGAGACTCAAAGCGTACGTGTGGTCCCCAAGGGAGAGGATAAGGAGATGGACATCTATGTGTCA
AGCCAGGATGCTGCATTTACACAGGAAATGGTGGCTCGCACCTTGGGCATCCCAAAGAATAGGATCAACT
GCCATGTGAAAAGGGTTGGTGGAGCCTTCGGAGGGAAAGCAAGCAAGCCTGGGCTCCTGGCATCCGTGGC
AGCTGTAGCCGCACAGAAGACCGGCCGCCCAATACGTTTCATTCTAGAGCGTAGGGATGACATGTTGATA
ACTGGAGGACGTCACCCACTACTCGGGAAATACAAGATTGGCTTCATGAACAATGGGAAAATCAAGGCGG
CAGACATCCAGCTTTATATCAATGGAGGCTGCACCCCAGATGATTCTGAACTGGTGATAGAATATGCTTT
GCTCAAACTGGAAAATGCTTACAAGATCCCCAACCTCCGTGTCCGAGGTCGAGTCTGTAAGACCAACTTG
CCTTCCAATACAGCGTTTCGAGGATTTGGCTTTCCCCAGGGGGCATTTGTAACAGAAACCTGTATGTCCG
CTGTGGCAGCCAAATGCCGCTTACCACCAGAGAAGGTTCGAGAGCTAAACATGTACAGAACAATCGATAG
GACAATTCACAACCAAGAGTTTGACCCAACGAATCTGCTACAGTGCTGGGAGGCATGTGTGGAAAATTCT
TCCTACTATAACAGGAAAAAAGCTGTGGATGAATTTAACCAACAGAGATTTTGGAAGAAGAGAGGAATTG
CCATCATCCCCATGAAATTCTCAGTTGGATTTCCAAAGACATTTTATTATCAGGCTGCCGCTTTGGTCCA
GATCTACACAGATGGGTCTGTACTAGTTGCTCATGGTGGTGTTGAACTGGGACAAGGTATTAACACCAAA
ATGATACAGGTGGCCAGCCGTGAATTAAAGATACCTATGTCTTATATACACCTGGATGAGATGAGCACTG
TGACCGTCCCCAACACGGTTACCACTGGAGCATCCACCGGTGCCGATGTCAACGGGAGAGCTGTTCAGAA
TGCCTGTCAGATCCTTATGAAGCGTCTGGAACCCATCATCAAGCAGAATCCTAGTGGTACCTGGGAAGAA
TGGGTTAAGGAAGCTTTTGTTCAAAGCATTAGCCTCTCGGCCACTGGATATTTTAGGGGTTACCAAGCTG
ACATGGACTGGGAGAAGGGAGAAGGTGACATTTTTCCCTATTTTGTTTTTGGAGCTGCCTGTTCTGAGGT
TGAAATTGATTGTCTGACGGGAGCTCACAAGAACATTAGAACCGACATTGTTATGGATGGATCATTCAGT
ATAAATCCTGCTGTGGACATAGGCCAGATTGAAGGGGCATTTGTTCAAGGTCTTGGACTGTATACTCTAG
AGGAACTGAAATATTCACCTGAAGGAGTCCTATACACTCGTGGTCCACACCAGTACAAAATAGCATCAGT
TACCGACATCCCAGAAGAATTCCATGTATCACTGTTGACACCAACCCCAAACCCAAAAGCCATCTACTCT
TCTAAGGGCCTTGGCGAAGCTGGAACGTTTCTGGGCTGTTCTGTGTTCTTCGCTATTGCCGCGGCCGTGG
CTGCAGCTCGAGAGGAGAGAGGCTTGTCCCCAATTTGGGCCATAAACAGCCCTGCCACAGCAGAAGTGAT
CCGCATGGCCTGTGAGGACCAGTTCACGAACCTGGTTCCACAAACGGATTCTAAATGCTGTAAGCCGTGG
TCCATCCCAGTTGCCTAG

Translation (1335 aa):
MSPSKESDELIFFVNGKKVTERNADPEVNLLFYLRKVIRLTGTKYGCGGGDCGACTVMISRYDPISKRIS
HFSATACLVPICSLHGAAVTTVEGIGSTKTRIHPVQERIAKGHGTQCGFCTPGMVMSIYTLLRNHPEPST
EQIMETLGGNLCRCTGYRPIVESAKSFCPSSTCCQMNGEGKCCLDEEKNEPERKNSVCTKLYEKKEFQPL
DPTQELIFPPELMRMAEESQNTVLTFRGERTTWIAPGTLNDLLELKMKHPSAPLVIGNTYLGLHMKFTDV
SYPIIISPARILELFVVTNTKQGLTLGAGLSLTQVKNVLSDVVSRLPKEKTQIYCALLKQLKTLAGQQIR
NVASLGGHIISRLPTSDLNPILGIGNCILNVASTEGIQQIPLNDHFLAGVPDAILKPEQVLISVFVPRSS
KWEFVSAFRQAPRQQNAFATVNAGMKVVFKEDTNTITDLGILYGGIGATVISADKSCRQLIGRCWDEEML
DDAGKMICEEVSLLMAAPGGMEEYRKTLAISFLFMFYLDVLKQLKTRDPHKYPDISQKLLHILEDFPLTM
PYGMQSFQDVDFQQPLQDPIGRPIMHQSGIKHATGEAVFCDDMSVLPGELFLAVVTSSKSHAKIISLDAS
EALASLGVVDVVTARDVPGDNGREEESLYAQDEVICVGQIVCAVAADSYAHAQQAAKKVKIVYQDIEPMI
VTVQDALQYESFIGPERKLEQGNVEEAFQCADQILEGEVHLGGQEHFYMETQSVRVVPKGEDKEMDIYVS
SQDAAFTQEMVARTLGIPKNRINCHVKRVGGAFGGKASKPGLLASVAAVAAQKTGRPIRFILERRDDMLI
TGGRHPLLGKYKIGFMNNGKIKAADIQLYINGGCTPDDSELVIEYALLKLENAYKIPNLRVRGRVCKTNL
PSNTAFRGFGFPQGAFVTETCMSAVAAKCRLPPEKVRELNMYRTIDRTIHNQEFDPTNLLQCWEACVENS
SYYNRKKAVDEFNQQRFWKKRGIAIIPMKFSVGFPKTFYYQAAALVQIYTDGSVLVAHGGVELGQGINTK
MIQVASRELKIPMSYIHLDEMSTVTVPNTVTTGASTGADVNGRAVQNACQILMKRLEPIIKQNPSGTWEE
WVKEAFVQSISLSATGYFRGYQADMDWEKGEGDIFPYFVFGAACSEVEIDCLTGAHKNIRTDIVMDGSFS
INPAVDIGQIEGAFVQGLGLYTLEELKYSPEGVLYTRGPHQYKIASVTDIPEEFHVSLLTPTPNPKAIYS
SKGLGEAGTFLGCSVFFAIAAAVAAAREERGLSPIWAINSPATAEVIRMACEDQFTNLVPQTDSKCCKPW
SIPVA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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