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Report for CCDS20043.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20043.1 Public Mus musculus 6 Prss3b 23 108 98 CCDS HistoryNCBI Gene:67373Re-query CCDS DB by CCDS ID:20043.1Re-query CCDS DB by GeneID:67373See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20043.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000031931.5 ENSMUSP00000031931.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000031931.5Link to Ensembl Protein Viewer:ENSMUSP00000031931.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000031931Re-query CCDS DB by Protein ID:ENSMUSP00000031931
Original member Current member NCBI NM_023333.4 NP_075822.3 Accepted alive Link to Nucleotide Sequence:NM_023333.4Link to Protein Sequence:NP_075822.3Re-query CCDS DB by Nucleotide ID:NM_023333Re-query CCDS DB by Protein ID:NP_075822Link to BLAST:NP_075822.3

Chromosomal Locations for CCDS 20043.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 41031635 41031784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41032305 41032441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41032942 41033195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41034244 41034406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41035439 41035478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (744 nt):
ATGAAGACCTTAATCTTCCTTGCCTTCCTTGGAGCTGCTGTTGCTCTCCCCCTGGATGATGATGATGACA
AAATTGTTGGAGGCTACACCTGCCAGAGGAATGCTCTCCCCTACCAGGTGTCTCTGAACAGCGGCTACCA
TTTTTGTGGAGGCTCACTCATCAATTCCCAGTGGGTTGTTTCAGCCGCTCACTGCTACAAATCCCGAATT
CAGGTGCGCCTGGGAGAACACAACATTGATGCCCTTGAGGGTGGTGAGCAATTCATTGATGCAGCTAAAA
TCATCCGCCACCCCAACTATAATGCAAACACCTATAACAATGACATCATGTTGATTAAGCTGAAGACAGC
TGCCACCCTCAACTCTCGAGTGTCCACTGTCGCTCTGCCAAGATCTTGTCCATCAGCTGGTACTAGGTGT
CTTGTGTCTGGCTGGGGCAACACCCTGAGCTCTGGCACCAACTACCCTTCACTCCTTCAGTGTCTTGATG
CTCCTGTCCTCTCTGACAGTTCTTGCACAAGTTCTTACCCAGGCAAGATCACTAGCAACATGTTCTGTCT
GGGCTTCCTGGAGGGCGGAAAGGACTCCTGCCAGGGTGACTCTGGTGGCCCCGTAGTCTGCAATGGACAA
CTCCAGGGTGTTGTTTCCTGGGGTTATGGCTGTGCTCAGAGAGGAAAACCTGGTGTCTACACCAAGGTGT
GCAAGTATGTGAACTGGATTCAGCAGACCATCGCTGCCAACTAA

Translation (247 aa):
MKTLIFLAFLGAAVALPLDDDDDKIVGGYTCQRNALPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSRI
QVRLGEHNIDALEGGEQFIDAAKIIRHPNYNANTYNNDIMLIKLKTAATLNSRVSTVALPRSCPSAGTRC
LVSGWGNTLSSGTNYPSLLQCLDAPVLSDSSCTSSYPGKITSNMFCLGFLEGGKDSCQGDSGGPVVCNGQ
LQGVVSWGYGCAQRGKPGVYTKVCKYVNWIQQTIAAN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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