CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS57418.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
57418.1 |
Public |
Mus musculus |
6 |
Nup205 |
23 |
108 |
98 |
|
Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 57418.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000043815.15 |
ENSMUSP00000039656.9 |
Accepted |
alive |
|
|
|
NCBI |
NM_027513.1 |
NP_081789.1 |
Accepted |
alive |
|
Chromosomal Locations for CCDS 57418.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6027 nt): ATGGCGGCGCTGTTGGCGGTAAATTCGGCTGCCAGCCTGTGGGGACCCTACAAAGACATTTGGCAGACAG TTGGAAGTGCTCTTTGGAGAAGACAGCCTGAAGCTGTCCACCTTCTTGACATGATTTTGAAGAAACACAA ACCCGACTTCATTTCACTGTTCAAAAACCCACCCAAAAATGTTCAACAGCATGAGAAAATTCAGAAAGCC AGTTCAGAGGGTGTTGCGATCCAGGGGCAACAAGGAACCAGACTTCTTCCTGAGCAGCTCATTAAAGAAG CATTTATCATCAGTGACCTTTTTGATATTGGGGAATTGTCAGCTGTTGAGCTTCTCCTTGCTGGAGAGCA TCAGCAGCCACATTTCCCTGGCCTCACCAGGGGATTGGTAGCTGTCCTTTTATACTGGGATGGAAAGCGG TGCATTGCAAATTCTCTCAGAACCCTGATACAGTCTAGACGAGGAAAGACATGGACATTAGAACTCAGTC CAGAGCTGGTTTCCATGACAACACGCTTTACAGATGAGCTGATGGAGCAAGGATTGACTTACAAAGTCCT TACTTTGCTGTCACAGATTGATGTGAATAATGAGTTTGAGAAACTACAGAGAGAGAGAGGTTTGGGCAGT GAGAAACACCGCAAAGAGGTTTCTGATCTCATCAAGGAGTGCAGGCAGTCTCTGGCTGAAAGTCTTTTTG CCTGGGCTTGCCAGTCACCATTACCCAAAGATGACACCCTCCTACTTATTGGACATTTGGAAAGAGTGAC AGTTGAGGCCAATGGCTCCCTAGATGCAGTGAATCTGTGCCTCCTTATGGCTCTTCTGTACTGTTTTGAT ACCAGCTTTATAGACCAAAGCACAGAGGAACGAGATGATATGATTCACCACCTTCCACTGTTGACAGAGA GACAGTACGTTTCGACAATTCACTCTCGCCTCCAGGACTCTCAGCCTTGGAAGCTTCCTGGACTGCAGGC CACTGTTAGGCTTGCCTGGGCCCTGGCGTTGAGGGGGATATCCCAGCTACCGGATGTAACAGCCCTGGCT GAGTTCACAGAAGCAGATGAAGCAATTGCAGAGCTGGCCATTGCTGATAATGTCTTCCTGTTCCTCAGCG AGGCTGTTGTGCTGGCTGAAAACTTCTATCAGGAAGAGTTTTACATCCGCAGAATCCACAGTCTTATCAC AGACTTCCTTGCATTTATGCCAATGAAAGTGAAACAGCTGAAGAATCGGGCAGATGAAGATGCTCGAATG ATTCACATGAGTATACAGATGGGTAATGAACCCCCCATCTCACTTAGAAGGGACCTGGAACACTTAATGC TCCTGATTGGTGAACTGTATAAAAAAAATCCATTTCATCTGGAGCTTGCGCTAGAATACTGGTGTCCCTC AGAGCCTCTGCAGACTCCCACAGTCATGGGCTCTTACCTGGGAGTAGCTCATCAGCGGCCTCCTCAGCGC CAGGTTGTCTTGTCAAAGTTTGTTAGACAAATGGGTGACCTGTTGCCTCCAACTATTTATATTCCTTATT TGAAAATGCTCCAGGGCCTGGCCAATGGGCCTCAGTGTGCCCACTACTGTTTTAGCCTGCTCAAAGTCAA TGGTAGTAGTCATGTTGAAAACATACAGGGAGCAGGTGGCAGTCCTGTTTCCTGGGAGCATTTCTTTCAT TCCTTATTGCTCTACCATGAGCATCTCCGGAAGGACCTGCCAAGTGCAGACAGTGTCCAGTACCGTCACC TTCCTTCCCGTGGCATCACCCAGAAGGAGCAAGATGGACTGATTGCTTTTCTCCAGCTGACATCTACTAT CATTACTTGGAGTGAGAATGCTCGCTTGGCCCTCTGTGAACATCCCCAGTGGACGCCTGTTGTGGTGATT CTGGGGCTCCTGCAGTGCAGTATTCCTCCAGTTCTCAAAGCTGAGCTACTGAAGACACTTGCAGCTTTTG GAAAGTCTCCTGAAATTGCCGCTTCACTTTGGCAGTCGTTGGAATACACACAGATACTGCAGACAGTCAG GGTTCCAAGCCAGAGGCAGGCTATTGGTATTGAGGTTGAACTCAATGAAATAGAGTCCCGGTGTGAAGAG TACCCCCTGACTAGGGCCTTTTGCCAGTTGATCAGCACCCTGGTGGAGAGCTCATTCCCTTCTAATCTGG GTGCTGGCCTGCGCCCCCCTGGCTTTGACCCTTACTTGCAGTTCCTGAGAGATTCTGTGTTTCTCCGATT CCGTACAAGAGCTTACCGGAGAGCCGCTGAAAAGTGGGAAGTCGCTGAGGTTGTCTTGGAAGTGTTTTAT AAGCTGTTGAGAGATTATGAACCTCAGCTTGAAGATTTTGTAGATCAATTTGTGGAACTACAAGGAGAAG AAATCATAGCCTATAAGCCACCTGGCTTTAGTCTGATGTATCACCTTCTGAACGAGTCACCCATGCTGGA GCTTGCCCTCAGTTTACTGGAAGAAGGAGTTAAGCAGCTTGATACCTACGCTCCTTTCCCTGGAAAGAAA CACCTGGAAAAAGCAGTTCAGCATTGCCTGGCACTGCTCAACCTCACTCTGCAAAAGGAGAACCTTTTCA TGGACCTTCTGAGAGAGAGTCAGCTGGCTCTCATCGTCTCGCCATTGGAACAGCTCTTGCAGGGAATTAA TCCGAGGACTAAGAAGGCAGACAACGTGGTTAACATCGCCAGGTATCTGTATCATGGGAACAATAATCCT GAGTTGGCATTTGAAAGTGCGAAGATCCTCTGCTGTATCTCTTGTAATTCCAACATTCAGGTCAAAATGG TTGGCGATTTCACACATGACCAGAGTGTGAGCCAGAAGCTGATGGCTGGATTTGTAGAGTGCTTGGATTA TGAAGACACGGAAGAATTTGTACGTGTAGAAGAGGGCTCAGAATTAGAAAAGAAGTTAGCTGCGATCCGT CATGAAACGAGAATCCATATCTTGAATCTTCTCATCACATCTCTAGAACGCAATCCACCCAATCTTGCTC TCTACCTGTTGGGCTTTGAGTTAAAGAAACCCATCAGTACCACCAATCTACAAGACCCAGGAGTGTTAGG CTGCCCTCGGACGTGCCTGCATGCCATCCTCAACATTCTGGAGAAGGGCACAGAGGGGAGAGATGGCCCT GTGGCTGTGCGGGAGTATCCTCAGCTGGCCGACCTGTGCTACCAGGTGATATATCAGTTATGTGCATGCT CAGATACATCTGGTCCTACTATGAGGTACTTGAGAACCAGCCAGGATTTCTTATTTTCCCAGTTGCAACA TCTACCTTTCTCCAACAAAGAGCATGAAATCTCCATGCTGAGTCAGATGTCATGGCTTATGAAGACAGCC TCAATAGAGCTAAGAGTGACATCTCTGAATCGCCAGCGCTCACATACACAGAGGCTCCTGCACCTCTTAC TGGATGACATGCCGGTGAAGCCGTACTCAGATGGTGAAGGAGGAATGGAAGATGAAAACAGATCTGTCTC TGGGTTCCTTCATTTTGACACTGCCACAAAAGTGCGTCGAAAAATTCTAAGCATCCTTGACTCGATTGAC TTCAGTCAGGAGATCCCTGAGCCCTTGCAGCTGGATTTTTTTGACCGTGCTCAGATTGAGCAAGTCATTG CCAACTGTGAGCACAAGAATTTACAGGGGCAGACGGTCTGCAATGTCAAGCTTCTTCATAGAGTTCTCGT AGCTGAAGTCAATGCTCTTCAGGGTATGGCAGCAATAGGTCAGAGGCCTCTGCTGATGGAGGAAATCAGC ACTATTCTTCAGTATGTTGTAGGAAGAAACAAGCTGCTACAGTGTCTTCATGCAAAGCGGCATGCTCTAG AGTCCTGGAGGCAGCTGGTAGAAATTATCCTGACAGCTTGTCCTCAGGAGCTCATCCAGGCAGAAGACCG ACAGCTCATTATCCGTGACCTTTTACAAGATGTGCACGATAAGGTGCTGGATGATGAAGCCGCACAAGAG TTAATGCCAGTGGTTGCCGGCGCTGTGTTCACCCTGACTGCTCACCTAAGCCAGGCTGTGCGCACGGAAC AGAGGCAGCCGTTGGTCTCAGGACCTGGAGAGGCCCAGTATGCTTTCATGCTTGATAGTTCTTTGACCTC ATCTCCTGCAGCAGAGAGCCGGCCAGTAGGCTTTGCGTCTATCGGAGATTCTTCGCTTCACATCATACTG AAGAAACTGTTGGACTTTATTTTGAAGACAGGTGGTGGCTTCCAGCGTGTAAGGACTCACCTGTACGGCT CTCTGCTTTATTATTTACAGATTGCCCAGAGACCAGATGAGCCGGACACACTAGAAGCTGCTAAGAAAAC TATGTGGGAACGGCTGACTGCCCCTGAAGATGTGTTTAGTAAATTACAACGAGAGAACATGGCTATCATT GAGAGTTATGGCGCTGCCCTCATGGAAGTGGTCTGTCGAGACGCTTGTGATGGCCATGAGATTGGAAGGA TGCTGGCCCTGGCTCTCCTTGATCGGATTGTCTCTGTGGACAAGCAGCATCAGTGGCTCTTGTACCTTTC TAACAGTGGCTATTTGAAGGTCCTTGTGGATAGCTTGGTGGACGATGACCGAACTCTACAGAGCTTGCTG ACTCCGCAGCCTCCTCTCTTAAAAGCCCTTTATACGTATGAATCCAAAATGGCATTTCTCACGAGAGTGG CTAAGGAACAGCAAGGTTCAGCAGAGCTCCTGAGATCAGGGGTGATTGTGAGGCTGGCCCAGTGCCAAGT CTATGATATGCGCCCAGAAATGGACTCTCATGGCATGTTTGGCATGAGAGACCCACCAGTATTCATCCCA ACGCCTGTGGACCGATACCGGCAGATTCTCCTTCCAGCTCTCCAGCTGTGCCAGGTCATCCTCACATCCA GTATGTCCCAGCACTTGCAGGCAGCAGGGCAGGTGCTGCAGTTTCTTGTTTCACATTCTGATACCATCCA AGCAATCCTGCGCTGTCAGGATGTTAGCACTGGCTCTTTGCAGGAATTAGCTCTGCTGACAGGAATCATA AGTAAAGCAGCGCTTCCTGGTATGTTAAGTGAACTTGATGTAGATGTAAATGAAGGATCCTTAATGGAGC TCCATGGACACATTGCAAGGTTTCAGCGCCAGTGCTTAGGCCTACTAAGTCGCTTTGGTGGTGCTGACAG ACTGCGGCAGTTTAAATTTCAAGATAATAATGCGGAGGGAGATAGGGTCAGCAAGAAAGATGAAATTGAG CTGGCCATGCAGCAGATTTGTGCCAATGTGATGGAATATTGCCAGTCATTCATACAGCAGAACTCCTCTA ACCTCCAGAGTGCTGCTATGTGTCTCTTCACCCCGAGCCTTTCAGAGACAGTTAACAGAGATGGAGCACG GCAAGATACCCAGGTTCCAGTCGTTCCGTATTGGCGCCTGCCTGGCTTGGGCATTATTATCTACCTGCTG AAGCAGAGTGCCACTGATTTCTTTAGCTACTATGACAGTCACCGTCGCAGTGTCAACAAGCTGCAGAATG TAGAACAACTTCCTCCGGATGAGATAAAAGAGTTATGCCAGTCTGTGATGCCTGCTGGTATTGATAAAAT CTCTACTGCACAGAAGTGTGTCTTAGCAAGACGTCGTCTGGTGAAGCTGATCAACAACCGTGCCAAACTG CTGTCCCTCTGTTCCTATATCATCGAGACCTGCCTGTTTATTCTTTGGCGCCATCTGGAGTATTATTTGT TACATTGCACGCCAATGGATTCCCAAGATTCATTGTTTGCCTCTAGGACTTTATTTAAAAGCAGAAGACT ACAAGAACCCAATCTGGACTTCAGAAGTGGACTATCTCAAGTGAACCAGCACGATATAGACCAGCTTCAG TCTGATGCTGTCAACGCTTTCGGAGAGTCGCTGCAAAAGAAACTTCTTGACATTGAAGGGTTGTACTCAA AAGTTCGATCCCGCTATAGTTTCATCCAGGCTCTCATCAGACGTATCCGTGGCCTGCTGAGGCTGTCCAG GAACTGA
Translation (2008 aa): MAALLAVNSAASLWGPYKDIWQTVGSALWRRQPEAVHLLDMILKKHKPDFISLFKNPPKNVQQHEKIQKA SSEGVAIQGQQGTRLLPEQLIKEAFIISDLFDIGELSAVELLLAGEHQQPHFPGLTRGLVAVLLYWDGKR CIANSLRTLIQSRRGKTWTLELSPELVSMTTRFTDELMEQGLTYKVLTLLSQIDVNNEFEKLQRERGLGS EKHRKEVSDLIKECRQSLAESLFAWACQSPLPKDDTLLLIGHLERVTVEANGSLDAVNLCLLMALLYCFD TSFIDQSTEERDDMIHHLPLLTERQYVSTIHSRLQDSQPWKLPGLQATVRLAWALALRGISQLPDVTALA EFTEADEAIAELAIADNVFLFLSEAVVLAENFYQEEFYIRRIHSLITDFLAFMPMKVKQLKNRADEDARM IHMSIQMGNEPPISLRRDLEHLMLLIGELYKKNPFHLELALEYWCPSEPLQTPTVMGSYLGVAHQRPPQR QVVLSKFVRQMGDLLPPTIYIPYLKMLQGLANGPQCAHYCFSLLKVNGSSHVENIQGAGGSPVSWEHFFH SLLLYHEHLRKDLPSADSVQYRHLPSRGITQKEQDGLIAFLQLTSTIITWSENARLALCEHPQWTPVVVI LGLLQCSIPPVLKAELLKTLAAFGKSPEIAASLWQSLEYTQILQTVRVPSQRQAIGIEVELNEIESRCEE YPLTRAFCQLISTLVESSFPSNLGAGLRPPGFDPYLQFLRDSVFLRFRTRAYRRAAEKWEVAEVVLEVFY KLLRDYEPQLEDFVDQFVELQGEEIIAYKPPGFSLMYHLLNESPMLELALSLLEEGVKQLDTYAPFPGKK HLEKAVQHCLALLNLTLQKENLFMDLLRESQLALIVSPLEQLLQGINPRTKKADNVVNIARYLYHGNNNP ELAFESAKILCCISCNSNIQVKMVGDFTHDQSVSQKLMAGFVECLDYEDTEEFVRVEEGSELEKKLAAIR HETRIHILNLLITSLERNPPNLALYLLGFELKKPISTTNLQDPGVLGCPRTCLHAILNILEKGTEGRDGP VAVREYPQLADLCYQVIYQLCACSDTSGPTMRYLRTSQDFLFSQLQHLPFSNKEHEISMLSQMSWLMKTA SIELRVTSLNRQRSHTQRLLHLLLDDMPVKPYSDGEGGMEDENRSVSGFLHFDTATKVRRKILSILDSID FSQEIPEPLQLDFFDRAQIEQVIANCEHKNLQGQTVCNVKLLHRVLVAEVNALQGMAAIGQRPLLMEEIS TILQYVVGRNKLLQCLHAKRHALESWRQLVEIILTACPQELIQAEDRQLIIRDLLQDVHDKVLDDEAAQE LMPVVAGAVFTLTAHLSQAVRTEQRQPLVSGPGEAQYAFMLDSSLTSSPAAESRPVGFASIGDSSLHIIL KKLLDFILKTGGGFQRVRTHLYGSLLYYLQIAQRPDEPDTLEAAKKTMWERLTAPEDVFSKLQRENMAII ESYGAALMEVVCRDACDGHEIGRMLALALLDRIVSVDKQHQWLLYLSNSGYLKVLVDSLVDDDRTLQSLL TPQPPLLKALYTYESKMAFLTRVAKEQQGSAELLRSGVIVRLAQCQVYDMRPEMDSHGMFGMRDPPVFIP TPVDRYRQILLPALQLCQVILTSSMSQHLQAAGQVLQFLVSHSDTIQAILRCQDVSTGSLQELALLTGII SKAALPGMLSELDVDVNEGSLMELHGHIARFQRQCLGLLSRFGGADRLRQFKFQDNNAEGDRVSKKDEIE LAMQQICANVMEYCQSFIQQNSSNLQSAAMCLFTPSLSETVNRDGARQDTQVPVVPYWRLPGLGIIIYLL KQSATDFFSYYDSHRRSVNKLQNVEQLPPDEIKELCQSVMPAGIDKISTAQKCVLARRRLVKLINNRAKL LSLCSYIIETCLFILWRHLEYYLLHCTPMDSQDSLFASRTLFKSRRLQEPNLDFRSGLSQVNQHDIDQLQ SDAVNAFGESLQKKLLDIEGLYSKVRSRYSFIQALIRRIRGLLRLSRN
|