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Report for CCDS85499.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85499.1 Public Mus musculus 8 Ing1 23 108 98 CCDS HistoryNCBI Gene:26356Re-query CCDS DB by CCDS ID:85499.1Re-query CCDS DB by GeneID:26356See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85499.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000210041.1 ENSMUSP00000147270.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000210041.1Link to Ensembl Protein Viewer:ENSMUSP00000147270.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000210041Re-query CCDS DB by Protein ID:ENSMUSP00000147270
Original member Current member EBI ENSMUST00000210740.1 ENSMUSP00000147476.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000210740.1Link to Ensembl Protein Viewer:ENSMUSP00000147476.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000210740Re-query CCDS DB by Protein ID:ENSMUSP00000147476
Original member Current member EBI ENSMUST00000209565.1 ENSMUSP00000147892.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000209565.1Link to Ensembl Protein Viewer:ENSMUSP00000147892.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000209565Re-query CCDS DB by Protein ID:ENSMUSP00000147892
Original member Current member EBI ENSMUST00000211007.1 ENSMUSP00000148030.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000211007.1Link to Ensembl Protein Viewer:ENSMUSP00000148030.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000211007Re-query CCDS DB by Protein ID:ENSMUSP00000148030
Original member Current member NCBI NM_001302457.1 NP_001289386.1 Accepted alive Link to Nucleotide Sequence:NM_001302457.1Link to Protein Sequence:NP_001289386.1Re-query CCDS DB by Nucleotide ID:NM_001302457Re-query CCDS DB by Protein ID:NP_001289386Link to BLAST:NP_001289386.1
Original member Current member NCBI NM_001302458.1 NP_001289387.1 Accepted alive Link to Nucleotide Sequence:NM_001302458.1Link to Protein Sequence:NP_001289387.1Re-query CCDS DB by Nucleotide ID:NM_001302458Re-query CCDS DB by Protein ID:NP_001289387Link to BLAST:NP_001289387.1
Original member Current member NCBI NM_001302459.1 NP_001289388.1 Accepted alive Link to Nucleotide Sequence:NM_001302459.1Link to Protein Sequence:NP_001289388.1Re-query CCDS DB by Nucleotide ID:NM_001302459Re-query CCDS DB by Protein ID:NP_001289388Link to BLAST:NP_001289388.1
Original member Current member NCBI NM_001302460.1 NP_001289389.1 Accepted alive Link to Nucleotide Sequence:NM_001302460.1Link to Protein Sequence:NP_001289389.1Re-query CCDS DB by Nucleotide ID:NM_001302460Re-query CCDS DB by Protein ID:NP_001289389Link to BLAST:NP_001289389.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001289386.1 185 Q9QXV3-2 185 100% 0 0
NP_001289387.1 185 Q9QXV3-2 185 100% 0 0
NP_001289388.1 185 Q9QXV3-2 185 100% 0 0
NP_001289389.1 185 Q9QXV3-2 185 100% 0 0

Chromosomal Locations for CCDS 85499.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 11561564 11562121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (558 nt):
ATGGTGGAGCTGGTGGAGAACCGCAGCAGACAGGTGGACAGTCACGTGGAGCTCTTCGAAGCACACCAGG
ACATCAGTGACGGCACTGGTGGCAGCGGCAAGGCGGGCCAGGACAAGTCGAAGAGTGAGGCCATCACACA
GGCAGATAAGCCGAATAACAAGCGGTCCAGGAGGCAGCGAAACAATGAGAATCGAGAGAACGCGTCGAAT
AATCACGACCATGATGACATCACCTCAGGAACGCCCAAGGAGAAGAAAGCAAAAACCTCAAAGAAGAAGA
AACGCTCCAAGGCCAAAGCAGAGAGGGAAGCGTCTCCTGCCGACCTTCCCATCGACCCCAACGAGCCCAC
GTACTGTCTGTGCAACCAGGTCTCCTACGGGGAGATGATCGGCTGTGACAACGACGAATGCCCCATCGAG
TGGTTCCACTTCTCCTGCGTGGGGCTCAACCATAAACCAAAGGGCAAGTGGTACTGCCCCAAGTGCCGTG
GGGAGAGCGAGAAGACCATGGACAAAGCCCTGGAGAAGTCCAAGAAAGAGAGGGCTTACAACAGGTAG

Translation (185 aa):
MVELVENRSRQVDSHVELFEAHQDISDGTGGSGKAGQDKSKSEAITQADKPNNKRSRRQRNNENRENASN
NHDHDDITSGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIE
WFHFSCVGLNHKPKGKWYCPKCRGESEKTMDKALEKSKKERAYNR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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