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Report for CCDS55157.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55157.1 Public Homo sapiens 7 FEZF1 24 110 108 CCDS HistoryNCBI Gene:389549Re-query CCDS DB by CCDS ID:55157.1Re-query CCDS DB by GeneID:389549See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55157.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000427185.2 ENSP00000392727.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000427185.2Link to Ensembl Protein Viewer:ENSP00000392727.2Re-query CCDS DB by Nucleotide ID:ENST00000427185Re-query CCDS DB by Protein ID:ENSP00000392727
Original member Current member NCBI NM_001160264.2 NP_001153736.1 Accepted alive Link to Nucleotide Sequence:NM_001160264.2Link to Protein Sequence:NP_001153736.1Re-query CCDS DB by Nucleotide ID:NM_001160264Re-query CCDS DB by Protein ID:NP_001153736Link to BLAST:NP_001153736.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001153736.1 425 A0PJY2-2 425 100% 0 0

Chromosomal Locations for CCDS 55157.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 122301997 122302355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122302799 122302931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122303177 122303311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122303637 122303858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122304009 122304437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1278 nt):
ATGGACAGTAGCTGCCACAACGCGACTACCAAAATGTTAGCGACTGCTCCAGCTCGGGGCAACATGATGA
GCACGTCCAAACCCTTGGCTTTCTCCATTGAACGAATCATGGCGCGCACCCCAGAGCCCAAGGCCCTGCC
AGTCCCCCACTTCCTGCAGGGAGCCTTACCCAAGGGGGAACCCAAGCACTCTCTGCATCTCAACTCGTCG
ATCCCCTGCATGATCCCCTTCGTGCCTGTGGCCTACGACACGAGCCCCAAGGCAGGAGTGACGGGCTCCG
AGCCGCGGAAGGCCAGTCTGGAGGCCCCGGCGGCGCCCGCGGCGGTGCCCTCGGCTCCCGCATTCAGCTG
CAGCGACCTGCTCAACTGCGCACTGAGTCTCAAGGGCGACCTGGCCCGCGACGCGCTGCCGCTGCAGCAG
TACAAGCTGCCAAAAACGTATTTAGCCGAAAGGAATAAACTGGTGGTCCCGGCGGTGGAGAAATACCCTT
CTGGAGTAGCTTTCAAAGACCTGTCCCAGGCTCAGCTGCAGCATTACATGAAAGAAAGCGCCCAGCTTCT
GTCGGAAAAAATCGCGTTCAAAACCTCGGATTTCAGCCGAGGCTCTCCTAATGCCAAGCCCAAAGTTTTC
ACTTGCGAAGTGTGTGGAAAGGTCTTTAATGCGCACTATAACTTAACCCGTCACATGCCAGTGCACACAG
GAGCCAGACCCTTCGTTTGCAAAGTGTGCGGAAAAGGTTTCAGGCAAGCAAGCACCCTGTGCAGGCACAA
GATCATTCACACGCAGGAAAAACCTCACAAATGTAACCAGTGTGGCAAAGCATTTAATAGAAGTTCCACT
TTAAACACTCATACCCGAATACACGCGGGCTACAAACCGTTTGTGTGTGAATTCTGTGGCAAAGGGTTTC
ATCAAAAAGGGAATTACAAAAACCACAAGTTGACCCACAGCGGGGAGAAGCAGTTCAAGTGCAATATCTG
CAACAAGGCTTTCCACCAGGTTTACAACCTCACCTTCCACATGCACACCCACAACGACAAGAAGCCTTTC
ACCTGCCCCACGTGCGGCAAGGGTTTCTGCAGGAACTTTGACCTCAAGAAGCATGTCCGCAAGCTGCACG
ACAGCAGCCTGGGGCTGGCCCGCACGCCAGCTGGCGAACCAGGCACTGAACCGCCGCCCCCGCTACCGCA
GCAGCCGCCGATGACGCTGCCTCCTCTGCAGCCGCCGCTGCCAACCCCGGGGCCCCTGCAGCCCGGGCTC
CACCAGGGCCACCAGTGA

Translation (425 aa):
MDSSCHNATTKMLATAPARGNMMSTSKPLAFSIERIMARTPEPKALPVPHFLQGALPKGEPKHSLHLNSS
IPCMIPFVPVAYDTSPKAGVTGSEPRKASLEAPAAPAAVPSAPAFSCSDLLNCALSLKGDLARDALPLQQ
YKLPKTYLAERNKLVVPAVEKYPSGVAFKDLSQAQLQHYMKESAQLLSEKIAFKTSDFSRGSPNAKPKVF
TCEVCGKVFNAHYNLTRHMPVHTGARPFVCKVCGKGFRQASTLCRHKIIHTQEKPHKCNQCGKAFNRSST
LNTHTRIHAGYKPFVCEFCGKGFHQKGNYKNHKLTHSGEKQFKCNICNKAFHQVYNLTFHMHTHNDKKPF
TCPTCGKGFCRNFDLKKHVRKLHDSSLGLARTPAGEPGTEPPPPLPQQPPMTLPPLQPPLPTPGPLQPGL
HQGHQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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