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Report for CCDS30524.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30524.1 Public Mus musculus X Asb9 23 108 98 CCDS HistoryNCBI Gene:69299Re-query CCDS DB by CCDS ID:30524.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30524.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033756.2 ENSMUSP00000033756.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033756.2Link to Ensembl Protein Viewer:ENSMUSP00000033756.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000033756Re-query CCDS DB by Protein ID:ENSMUSP00000033756
Original member Current member NCBI NM_027027.2 NP_081303.1 Accepted alive Link to Nucleotide Sequence:NM_027027.2Link to Protein Sequence:NP_081303.1Re-query CCDS DB by Nucleotide ID:NM_027027Re-query CCDS DB by Protein ID:NP_081303Link to BLAST:NP_081303.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081303.1 290 Q91ZT8 290 100% 0 0

Chromosomal Locations for CCDS 30524.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 164506505 164506586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 164514929 164515008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 164529408 164529515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 164531582 164531732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 164533457 164533591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 164535370 164535561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 164539540 164539664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (873 nt):
ATGGATGGTGAACAAAGGGGCAGGAGTGACAGGCCAGGAGGCTCTCCTCACCTACCATTCCTTTCAAACC
CGTTGATGGGAGATGTAGTGTCTGACTGGTCTCCTCTTCATGATGCTGCAATCCACGGATGTCTGCTGAC
CCTGAGGAACCTTATCAGCCAGGGTTGGCCTGTAAACATCATCACAGCAGATCACGTGTCTCCCCTCCAT
GAAGCATGCCTCAGAGGTCACCTGTCCTGTGCAAGTGTGTTACTAAGTCATGGAGCTCAGGTGAATGGCA
TGACCATAGACTGGCGAACTCCCTTGTTTAATGCATGTGTCAGCGGCAGTCAGGACTGTGTGAATCTGCT
GCTACAGCATGGAGCCACTCCCCACCCTGAGACTGAGCTGGCCTCTCCCATCCATGAGGCTGCTAAAAGA
GGATATGTGAAATGCATTGAGTCCCTCGCAGCTCATGGGGCCAATATTGACTATAACATCAGCCATCTCG
GAACACCTCTGTATGTGGCTTGTAAAAACCAGCAAGTAGCCTGTGCCAAGAAGCTCCTAGAATCAGGAGT
ATCTGTGAATCAAGGCAAAGGCTTGGATTCTCCTCTTCACGTAGTGGCCAGGATGTCCAGTGTGGAGCTG
GTGCATCTGCTCATGGATTTCGGAGCAAACGCTCAAGCCAAGAATGCTGATGGCAAACGTCCTGTGGACC
TGGTGCCTCTGGAGAGTCCTTTGATCCAGATCTTCTTGCAGAATGAAGGACCCCAGTCTTTGAGGCAGCT
ATGCCGCCTGAGAATCCGGAAATGCTTTGGCATTCGGCAGCATCATAAGATTTCTGAGCTCCTCCTCCCG
GAAGACCTGAAGCGCTTCCTTTTACACCTCTAA

Translation (290 aa):
MDGEQRGRSDRPGGSPHLPFLSNPLMGDVVSDWSPLHDAAIHGCLLTLRNLISQGWPVNIITADHVSPLH
EACLRGHLSCASVLLSHGAQVNGMTIDWRTPLFNACVSGSQDCVNLLLQHGATPHPETELASPIHEAAKR
GYVKCIESLAAHGANIDYNISHLGTPLYVACKNQQVACAKKLLESGVSVNQGKGLDSPLHVVARMSSVEL
VHLLMDFGANAQAKNADGKRPVDLVPLESPLIQIFLQNEGPQSLRQLCRLRIRKCFGIRQHHKISELLLP
EDLKRFLLHL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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