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Report for CCDS27809.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27809.1 Public Mus musculus 15 Rhebl1 23 108 98 CCDS HistoryNCBI Gene:69159Re-query CCDS DB by CCDS ID:27809.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27809.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000024518.10 ENSMUSP00000024518.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000024518.10Link to Ensembl Protein Viewer:ENSMUSP00000024518.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000024518Re-query CCDS DB by Protein ID:ENSMUSP00000024518
Original member NCBI NM_026967.4 NP_081243.1 Updated not alive Link to Nucleotide Sequence:NM_026967.4Link to Protein Sequence:NP_081243.1Re-query CCDS DB by Nucleotide ID:NM_026967Re-query CCDS DB by Protein ID:NP_081243
Current member NCBI NM_026967.5 NP_081243.1 Accepted alive Link to Nucleotide Sequence:NM_026967.5Link to Protein Sequence:NP_081243.1Re-query CCDS DB by Nucleotide ID:NM_026967Re-query CCDS DB by Protein ID:NP_081243Link to BLAST:NP_081243.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081243.1 184 Q9D8T3 184 100% 0 0

Chromosomal Locations for CCDS 27809.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 98878205 98878297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 98878453 98878534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 98879008 98879055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 98879259 98879315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 98879405 98879487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 98879777 98879844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 98880508 98880579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 98881150 98881201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (555 nt):
ATGCCGCTGGTGCGCTACAGGAAGGTGGCCATCCTAGGGTACCGCTCCGTAGGGAAGACATCTTTGGCAC
ATCAATTTGTGGAAGGCGAGTTCCTGGAAGGCTACGATCCTACAGTGGAGAATACTTACAGCAAGACAGT
GACTCTTGGCAAAGATGAGTTTCACCTACATCTGGTGGACACAGCAGGGCAGGATGAGTACAGCATTCTG
CCCTACTCGCTCATCATCGGGGTCCATGGTTACGTTCTTGTATACTCGGTTAACTCTCTGCGCAGCTTTC
AGATCGTTAAGAACCTGTACCAAAAGCTACACGAAGGCCACGGTAAAACCCGGCTGTCGGTGCTGCTTGT
GGGGAACAAGGCAGATCTCTCTCCTGAGAGAGAGGTGCAGGCAGTTGAAGGGAAGAAGCTAGCAGAGTCC
TGGGGTGCGATGTTTATGGAGTCGTCTGCTCGGGATAATCAGCTAACTCAAGATGTCTTCATCAAAGTCA
TCCAGGAGATTGCCCGGGTGGAGAATTCTTATGGACGACAAGACCGCCGATGCTATCTTATGTGA

Translation (184 aa):
MPLVRYRKVAILGYRSVGKTSLAHQFVEGEFLEGYDPTVENTYSKTVTLGKDEFHLHLVDTAGQDEYSIL
PYSLIIGVHGYVLVYSVNSLRSFQIVKNLYQKLHEGHGKTRLSVLLVGNKADLSPEREVQAVEGKKLAES
WGAMFMESSARDNQLTQDVFIKVIQEIARVENSYGRQDRRCYLM


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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