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Report for CCDS18357.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18357.1 Public Mus musculus 4 Tusc1 23 108 98 CCDS HistoryNCBI Gene:69136Re-query CCDS DB by CCDS ID:18357.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18357.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000066774.5 ENSMUSP00000069652.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000066774.5Link to Ensembl Protein Viewer:ENSMUSP00000069652.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000066774Re-query CCDS DB by Protein ID:ENSMUSP00000069652
Original member Current member NCBI NM_026954.1 NP_081230.1 Accepted alive Link to Nucleotide Sequence:NM_026954.1Link to Protein Sequence:NP_081230.1Re-query CCDS DB by Nucleotide ID:NM_026954Re-query CCDS DB by Protein ID:NP_081230Link to BLAST:NP_081230.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081230.1 205 Q673H1 205 100% 0 0

Chromosomal Locations for CCDS 18357.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 93334803 93335420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (618 nt):
ATGTGGCGCATGCGTGGTGGCGCCACCCGGCGCGGGAGCTGCGGCGGGGAAGGCGGCGGGAGCCGCGGCG
AGTCGGGCCGCCTGGGCCGGGCCCGTGAGGGCGGCGGTGGCGGTGGCGGCGTGGGCTGGCGAGGCCGCGC
GGGCGGGGCCCGGCGACAGCTGGAGGAGCGCTTCGCCGACCTGGCGGCCAGCCACCTGGAGGCCCTGCGC
GCGCGGGACGAGCGGGACCGGCAGAACGCGCGGCTGCGCGAGGAGAACGCCCGCCTGAGGCTGGAGAACC
GTCGGCTCAGGCGCGAGAACCGCAGCCTCTTCCGCCAGGCTCTGCGGCTGCCGGGCGACAGCGGCGAGCG
GGAGGCCGCCGTCGAGACCCTCGCCCCGGACGAGCCCGCCACCAACCGCAAGGCGAGAGGCCATGGCCGT
GAGGAGGAGCCGGGCAGCCCCAGGGCGCTGCGGGCCCGGCTAGAGAAGCTGGAGGTCATGTACCGCCGAG
CGCTCCTGCAGCTGCACCTAGAGCAGCAGGGCGCGCGCCCGCCGGGAGCCATCGAGGAGCCACCGCTCCA
AGAAACTGCCACCGGCCTGTGCGCCCATGATCCGGACGTTCCGAGGCCCTGGCTGTAG

Translation (205 aa):
MWRMRGGATRRGSCGGEGGGSRGESGRLGRAREGGGGGGGVGWRGRAGGARRQLEERFADLAASHLEALR
ARDERDRQNARLREENARLRLENRRLRRENRSLFRQALRLPGDSGEREAAVETLAPDEPATNRKARGHGR
EEEPGSPRALRARLEKLEVMYRRALLQLHLEQQGARPPGAIEEPPLQETATGLCAHDPDVPRPWL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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