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Report for CCDS4526.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4526.1 Public Homo sapiens 6 SIRT5 24 110 108 CCDS HistoryNCBI Gene:23408Re-query CCDS DB by CCDS ID:4526.1Re-query CCDS DB by GeneID:23408See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4526.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397350.7 ENSP00000380509.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397350.7Link to Ensembl Protein Viewer:ENSP00000380509.3Re-query CCDS DB by Nucleotide ID:ENST00000397350Re-query CCDS DB by Protein ID:ENSP00000380509
Original member Current member EBI ENST00000606117.2 ENSP00000476228.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000606117.2Link to Ensembl Protein Viewer:ENSP00000476228.1Re-query CCDS DB by Nucleotide ID:ENST00000606117Re-query CCDS DB by Protein ID:ENSP00000476228
Original member Current member EBI ENST00000680151.1 ENSP00000505086.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680151.1Link to Ensembl Protein Viewer:ENSP00000505086.1Re-query CCDS DB by Nucleotide ID:ENST00000680151Re-query CCDS DB by Protein ID:ENSP00000505086
Original member Current member EBI ENST00000680432.1 ENSP00000505496.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680432.1Link to Ensembl Protein Viewer:ENSP00000505496.1Re-query CCDS DB by Nucleotide ID:ENST00000680432Re-query CCDS DB by Protein ID:ENSP00000505496
Original member Current member NCBI NM_001376798.1 NP_001363727.1 Accepted alive Link to Nucleotide Sequence:NM_001376798.1Link to Protein Sequence:NP_001363727.1Re-query CCDS DB by Nucleotide ID:NM_001376798Re-query CCDS DB by Protein ID:NP_001363727Link to BLAST:NP_001363727.1
Original member Current member NCBI NM_001376799.1 NP_001363728.1 Accepted alive Link to Nucleotide Sequence:NM_001376799.1Link to Protein Sequence:NP_001363728.1Re-query CCDS DB by Nucleotide ID:NM_001376799Re-query CCDS DB by Protein ID:NP_001363728Link to BLAST:NP_001363728.1
Original member Current member NCBI NM_001376800.1 NP_001363729.1 Accepted alive Link to Nucleotide Sequence:NM_001376800.1Link to Protein Sequence:NP_001363729.1Re-query CCDS DB by Nucleotide ID:NM_001376800Re-query CCDS DB by Protein ID:NP_001363729Link to BLAST:NP_001363729.1
Original member Current member NCBI NM_001376801.1 NP_001363730.1 Accepted alive Link to Nucleotide Sequence:NM_001376801.1Link to Protein Sequence:NP_001363730.1Re-query CCDS DB by Nucleotide ID:NM_001376801Re-query CCDS DB by Protein ID:NP_001363730Link to BLAST:NP_001363730.1
Original member Current member NCBI NM_001376802.1 NP_001363731.1 Accepted alive Link to Nucleotide Sequence:NM_001376802.1Link to Protein Sequence:NP_001363731.1Re-query CCDS DB by Nucleotide ID:NM_001376802Re-query CCDS DB by Protein ID:NP_001363731Link to BLAST:NP_001363731.1
Original member Current member NCBI NM_001376803.1 NP_001363732.1 Accepted alive Link to Nucleotide Sequence:NM_001376803.1Link to Protein Sequence:NP_001363732.1Re-query CCDS DB by Nucleotide ID:NM_001376803Re-query CCDS DB by Protein ID:NP_001363732Link to BLAST:NP_001363732.1
Original member Current member NCBI NM_001376804.1 NP_001363733.1 Accepted alive Link to Nucleotide Sequence:NM_001376804.1Link to Protein Sequence:NP_001363733.1Re-query CCDS DB by Nucleotide ID:NM_001376804Re-query CCDS DB by Protein ID:NP_001363733Link to BLAST:NP_001363733.1
Original member Current member NCBI NM_001376805.1 NP_001363734.1 Accepted alive Link to Nucleotide Sequence:NM_001376805.1Link to Protein Sequence:NP_001363734.1Re-query CCDS DB by Nucleotide ID:NM_001376805Re-query CCDS DB by Protein ID:NP_001363734Link to BLAST:NP_001363734.1
Original member Current member NCBI NM_001376806.1 NP_001363735.1 Accepted alive Link to Nucleotide Sequence:NM_001376806.1Link to Protein Sequence:NP_001363735.1Re-query CCDS DB by Nucleotide ID:NM_001376806Re-query CCDS DB by Protein ID:NP_001363735Link to BLAST:NP_001363735.1
Original member Current member NCBI NM_001376807.1 NP_001363736.1 Accepted alive Link to Nucleotide Sequence:NM_001376807.1Link to Protein Sequence:NP_001363736.1Re-query CCDS DB by Nucleotide ID:NM_001376807Re-query CCDS DB by Protein ID:NP_001363736Link to BLAST:NP_001363736.1
Original member Current member NCBI NM_012241.5 NP_036373.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012241.5Link to Protein Sequence:NP_036373.1Re-query CCDS DB by Nucleotide ID:NM_012241Re-query CCDS DB by Protein ID:NP_036373Link to BLAST:NP_036373.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001363727.1 310 Q9NXA8-1 310 100% 0 0
NP_001363728.1 310 Q9NXA8-1 310 100% 0 0
NP_001363729.1 310 Q9NXA8-1 310 100% 0 0
NP_001363730.1 310 Q9NXA8-1 310 100% 0 0
NP_001363731.1 310 Q9NXA8-1 310 100% 0 0
NP_001363732.1 310 Q9NXA8-1 310 100% 0 0
NP_001363733.1 310 Q9NXA8-1 310 100% 0 0
NP_001363734.1 310 Q9NXA8-1 310 100% 0 0
NP_001363735.1 310 Q9NXA8-1 310 100% 0 0
NP_001363736.1 310 Q9NXA8-1 310 100% 0 0
NP_036373.1 310 Q9NXA8-1 310 100% 0 0

Chromosomal Locations for CCDS 4526.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 13584111 13584225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13588331 13588464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13591669 13591894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13595477 13595564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13596963 13597016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13599032 13599155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13600834 13600949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13611790 13611865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGCGACCTCTCCAGATTGTCCCAAGTCGATTGATTTCCCAGCTATATTGTGGCCTGAAGCCTCCAGCGT
CCACACGAAACCAGATTTGCCTGAAAATGGCTCGGCCAAGTTCAAGTATGGCAGATTTTCGAAAGTTTTT
TGCAAAAGCAAAGCACATAGTCATCATCTCAGGAGCTGGTGTTAGTGCAGAAAGTGGTGTTCCGACCTTC
AGAGGAGCTGGAGGTTATTGGAGAAAATGGCAAGCCCAGGACCTGGCGACTCCCCTGGCCTTTGCCCACA
ACCCGTCCCGGGTGTGGGAGTTCTACCACTACCGGCGGGAGGTCATGGGGAGCAAGGAGCCCAACGCCGG
GCACCGCGCCATAGCCGAGTGTGAGACCCGGCTGGGCAAGCAGGGCCGGCGAGTCGTGGTCATCACCCAG
AACATCGATGAGCTGCACCGCAAGGCTGGCACCAAGAACCTTCTGGAGATCCATGGTAGCTTATTTAAAA
CTCGATGTACCTCTTGTGGAGTTGTGGCTGAGAATTACAAGAGTCCAATTTGTCCAGCTTTATCAGGAAA
AGGTGCTCCAGAACCTGGAACTCAAGATGCCAGCATCCCAGTTGAGAAACTTCCCCGGTGTGAAGAGGCA
GGCTGCGGGGGCTTGCTGCGACCTCACGTCGTGTGGTTTGGAGAAAACCTGGATCCTGCCATTCTGGAGG
AGGTTGACAGAGAGCTCGCCCACTGTGATTTATGTCTAGTGGTGGGCACTTCCTCTGTGGTGTACCCAGC
AGCCATGTTTGCCCCCCAGGTGGCTGCCAGGGGCGTGCCAGTGGCTGAATTTAACACGGAGACCACCCCA
GCTACGAACAGATTCAGGTTTCATTTCCAGGGACCCTGTGGAACGACTCTTCCTGAAGCCCTTGCCTGTC
ATGAAAATGAAACTGTTTCTTAA

Translation (310 aa):
MRPLQIVPSRLISQLYCGLKPPASTRNQICLKMARPSSSMADFRKFFAKAKHIVIISGAGVSAESGVPTF
RGAGGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPNAGHRAIAECETRLGKQGRRVVVITQ
NIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEA
GCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETTP
ATNRFRFHFQGPCGTTLPEALACHENETVS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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