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Report for CCDS39113.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39113.1 Public Mus musculus 5 Rasl11b 23 108 98 CCDS HistoryNCBI Gene:68939Re-query CCDS DB by CCDS ID:39113.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 39113.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000051937.8 ENSMUSP00000053389.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000051937.8Link to Ensembl Protein Viewer:ENSMUSP00000053389.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000051937Re-query CCDS DB by Protein ID:ENSMUSP00000053389
Original member Current member NCBI NM_026878.1 NP_081154.1 Accepted alive Link to Nucleotide Sequence:NM_026878.1Link to Protein Sequence:NP_081154.1Re-query CCDS DB by Nucleotide ID:NM_026878Re-query CCDS DB by Protein ID:NP_081154Link to BLAST:NP_081154.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081154.1 247 Q922H7-1 247 100% 0 0

Chromosomal Locations for CCDS 39113.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 74195452 74195590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 74196103 74196159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 74197267 74197343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 74198109 74198579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (744 nt):
ATGCGCCTCATCCAGAACATGTGTACCATCGCAGAGTACCCCGCCCCAGGCAGCACCGCTGCCGACTGCT
GCCTGGGGGCTGCGGGCCGCCGGCTCGTTAAGATCGCCGTGGTAGGGGCCAGCGGCGTGGGCAAGACCGC
TTTGGTGGTCCGATTCCTCACTAAACGATTCATCGGGGACTACGAACGAAATGCAGGTAATCTCTACACA
AGACAAGTTCACATAGAAGGAGAAACGCTGGCTATTCAGGTCCAGGACACTCCGGGCATCCAGGTGCACG
AGAATGGCTTGAGTTGCAGCGAGCAGTTGAATCGCTGCATTCGCTGGGCAGATGCCGTCGTCCTCGTGTT
CTCCATCACGGACCACAAGAGCTACGAACTCATTAGCCAGCTCCACCAGCACGTGCAGCAGCTGCACCCG
GGCACTCGGCTGCCTGTGGTGTTGGTGGCTAACAAAGCTGACCTCCTACACGTCAAGCAGGTGGACCCTC
AGCTTGGCCTGCAACTGGCCAGCATGCTCGGCTGCTCCTTCTATGAAGTATCTGTCAGTGAAAATTACAA
CGACGTCTACAATGCTTTCCATGTCCTGTGCAAAGAAGTGAGCCCCAAGCAGCAGCCCAGCAGCACCCCC
GAGAAACGCAGAACTTCCCTCATCCCCAGACCCAAGTCGCCCAACATGCAAGACCTGAAGAGGAGGTTTA
AGCAGGCTCTGTCTGCCAAAGTGAGGACTGTCACGTCGGTCTGA

Translation (247 aa):
MRLIQNMCTIAEYPAPGSTAADCCLGAAGRRLVKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYT
RQVHIEGETLAIQVQDTPGIQVHENGLSCSEQLNRCIRWADAVVLVFSITDHKSYELISQLHQHVQQLHP
GTRLPVVLVANKADLLHVKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYNAFHVLCKEVSPKQQPSSTP
EKRRTSLIPRPKSPNMQDLKRRFKQALSAKVRTVTSV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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