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Report for CCDS6962.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6962.1 Public Homo sapiens 9 SURF6 24 110 108 CCDS HistoryNCBI Gene:6838Re-query CCDS DB by CCDS ID:6962.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6962.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372022.6 ENSP00000361092.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372022.6Link to Ensembl Protein Viewer:ENSP00000361092.4Re-query CCDS DB by Nucleotide ID:ENST00000372022Re-query CCDS DB by Protein ID:ENSP00000361092
Original member Current member NCBI NM_006753.6 NP_006744.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006753.6Link to Protein Sequence:NP_006744.2Re-query CCDS DB by Nucleotide ID:NM_006753Re-query CCDS DB by Protein ID:NP_006744Link to BLAST:NP_006744.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006744.2 361 O75683 361 100% 0 0

Chromosomal Locations for CCDS 6962.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 133331869 133332348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133332548 133332760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133333718 133333806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133334392 133334601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133336039 133336132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1086 nt):
ATGGCCTCTCTACTCGCCAAGGACGCCTACCTGCAGAGCCTGGCCAAGAAGATCTGCTCCCATTCGGCCC
CGGAACAGCAGGCGCGCACGCGGGCTGGCAAAACTCAAGGCTCAGAAACTGCAGGGCCCCCAAAAAAGAA
AAGGAAGAAAACACAAAAGAAATTCCGGAAGCGAGAAGAGAAGGCTGCTGAGCACAAGGCCAAGTCCTTG
GGGGAGAAATCTCCAGCAGCCTCTGGGGCCAGGAGGCCTGAGGCAGCCAAAGAGGAAGCAGCTTGGGCTT
CCAGCTCAGCAGGGAACCCTGCAGATGGCCTGGCCACTGAGCCTGAGTCTGTCTTTGCTCTGGATGTTCT
GCGACAGCGACTGCATGAGAAGATCCAGGAGGCCCGGGGCCAGGGCAGTGCCAAGGAGCTGTCCCCTGCC
GCCTTGGAGAAAAGGCGGCGGAGAAAGCAGGAACGGGACCGGAAGAAGAGGAAGCGAAAGGAGCTGCGGG
CGAAAGAGAAGGCCAGGAAGGCTGAGGAGGCCACGGAGGCCCAGGAGGTGGTGGAGGCAACCCCAGAGGG
GGCCTGCACGGAGCCGCGGGAGCCGCCCGGGCTGATCTTCAATAAGGTGGAGGTGAGCGAAGACGAGCCG
GCCAGCAAGGCGCAGCGCAGAAAAGAGAAGAGGCAGAGGGTGAAGGGGAACCTCACGCCGCTGACCGGGA
GGAACTACCGGCAGCTGCTGGAGCGCCTGCAGGCACGGCAGAGCCGGCTGGACGAGCTGCGCGGCCAGGA
TGAGGGGAAGGCGCAGGAGCTGGAGGCGAAGATGAAGTGGACCAACCTCCTCTACAAGGCGGAGGGCGTG
AAGATCCGTGACGACGAACGCCTGCTGCAGGAGGCCCTGAAGCGCAAGGAGAAGCGCAGGGCGCAGCGGC
AGCGCCGGTGGGAGAAGCGCACGGCCGGCGTGGTGGAGAAGATGCAGCAGCGCCAGGACCGGCGGCGGCA
GAACCTGCGCAGGAAGAAGGCGGCCCGCGCCGAGCGCCGCCTGCTCAGAGCCCGCAAGAAGGGCCGCATC
CTGCCGCAGGACCTGGAGCGCGCAGGCCTGGTCTGA

Translation (361 aa):
MASLLAKDAYLQSLAKKICSHSAPEQQARTRAGKTQGSETAGPPKKKRKKTQKKFRKREEKAAEHKAKSL
GEKSPAASGARRPEAAKEEAAWASSSAGNPADGLATEPESVFALDVLRQRLHEKIQEARGQGSAKELSPA
ALEKRRRRKQERDRKKRKRKELRAKEKARKAEEATEAQEVVEATPEGACTEPREPPGLIFNKVEVSEDEP
ASKAQRRKEKRQRVKGNLTPLTGRNYRQLLERLQARQSRLDELRGQDEGKAQELEAKMKWTNLLYKAEGV
KIRDDERLLQEALKRKEKRRAQRQRRWEKRTAGVVEKMQQRQDRRRQNLRRKKAARAERRLLRARKKGRI
LPQDLERAGLV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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