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Report for CCDS32596.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32596.1 Public Homo sapiens 17 SUPT6H 24 110 108 CCDS HistoryNCBI Gene:6830Re-query CCDS DB by CCDS ID:32596.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32596.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314616.11 ENSP00000319104.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000314616.11Link to Ensembl Protein Viewer:ENSP00000319104.6Re-query CCDS DB by Nucleotide ID:ENST00000314616Re-query CCDS DB by Protein ID:ENSP00000319104
Original member Current member EBI ENST00000347486.8 ENSP00000338143.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000347486.8Link to Ensembl Protein Viewer:ENSP00000338143.4Re-query CCDS DB by Nucleotide ID:ENST00000347486Re-query CCDS DB by Protein ID:ENSP00000338143
Original member Current member NCBI NM_001320755.2 NP_001307684.1 Accepted alive Link to Nucleotide Sequence:NM_001320755.2Link to Protein Sequence:NP_001307684.1Re-query CCDS DB by Nucleotide ID:NM_001320755Re-query CCDS DB by Protein ID:NP_001307684Link to BLAST:NP_001307684.1
Original member Current member NCBI NM_003170.5 NP_003161.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003170.5Link to Protein Sequence:NP_003161.2Re-query CCDS DB by Nucleotide ID:NM_003170Re-query CCDS DB by Protein ID:NP_003161Link to BLAST:NP_003161.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307684.1 1726 Q7KZ85-1 1726 100% 0 0
NP_003161.2 1726 Q7KZ85-1 1726 100% 0 0

Chromosomal Locations for CCDS 32596.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 28673402 28673510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28674283 28674441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28674537 28674613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28674970 28675162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28675401 28675485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28676157 28676430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28677715 28677816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28678076 28678192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28678545 28678634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28678821 28678963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28681256 28681404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28681882 28681980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28682727 28682856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28682942 28683092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28683268 28683422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28683621 28683816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28684586 28684725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28684844 28684961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28686339 28686415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28686654 28686789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28687088 28687225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28687304 28687471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28688091 28688218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28689354 28689561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28690082 28690229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28690921 28691063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28693696 28693836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28695352 28695547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28696844 28697082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28697620 28697733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28697906 28698030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28699781 28699893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28700173 28700250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28700346 28700512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28700941 28701128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28701439 28701625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5181 nt):
ATGTCTGATTTTGTGGAAAGCGAGGCTGAGGAGTCAGAGGAAGAATACAATGATGAAGGCGAGGTGGTAC
CCCGAGTCACCAAGAAATTTGTGGAAGAGGAGGATGATGATGAGGAGGAGGAGGAGGAGAACCTAGATGA
TCAGGATGAGCAAGGCAACTTGAAAGGCTTTATCAATGACGATGATGATGAAGATGAAGGGGAGGAGGAT
GAGGGCAGTGACTCTGGTGATTCAGAAGATGATGTTGGCCACAAGAAGAGAAAACGCACCTCTTTTGATG
ACCGCCTGGAGGATGATGATTTTGACCTCATTGAGGAGAATTTGGGTGTCAAAGTCAAAAGAGGACAAAA
GTACCGGCGTGTCAAAAAAATGTCAGATGACGAGGACGATGACGAGGAGGAATATGGCAAGGAGGAACAT
GAAAAAGAAGCTATTGCGGAAGAAATCTTCCAGGATGGGGAAGGGGAAGAAGGGCAGGAGGCCATGGAGG
CCCCCATGGCTCCTCCAGAGGAGGAGGAAGAAGATGATGAGGAGTCAGATATTGACGACTTCATTGTGGA
TGATGATGGACAGCCTCTGAAAAAACCTAAGTGGCGGAAAAAGCTTCCTGGATACACAGACGCGGCCCTG
CAAGAAGCCCAGGAAATCTTCGGTGTGGACTTTGACTATGATGAATTTGAGAAATACAATGAGTATGATG
AAGAACTGGAGGAAGAGTATGAGTATGAGGATGATGAGGCTGAGGGTGAAATCCGAGTGCGCCCCAAGAA
GACCACCAAGAAGCGTGTGAGCCGTAGGAGCATCTTTGAAATGTATGAGCCCAGTGAGCTAGAAAGCAGC
CACCTCACAGATCAGGACAATGAAATCCGAGCCACTGACCTGCCTGAGAGGTTCCAGCTCCGCTCCATCC
CAGTCAAGGGGGCTGAAGATGATGAACTAGAAGAAGAAGCTGACTGGATCTACAGGAATGCTTTTGCCAC
ACCAACCATTTCTCTCCAGGAAAGCTGTGATTACCTAGACCGAGGGCAGCCAGCCAGCAGCTTCAGTCGG
AAAGGGCCCAGCACAATTCAGAAGATCAAAGAGGCCCTGGGCTTCATGCGAAATCAGCATTTTGAGGTGC
CTTTTATTGCCTTCTATCGAAAGGAGTATGTGGAGCCTGAGTTGCACATCAATGACCTATGGAGAGTCTG
GCAGTGGGATGAAAAGTGGACCCAGCTGCGGATCCGTAAAGAGAACCTAACACGGCTGTTTGAGAAGATG
CAGGCTTATCAGTATGAACAGATCTCTGCTGACCCTGACAAACCTCTTGCTGATGGCATCCGGGCTCTGG
ACACCACTGACATGGAGAGGCTCAAGGATGTCCAATCAATGGATGAGCTGAAAGATGTCTACAACCATTT
TCTTCTTTATTATGGCCGAGACATCCCTAAGATGCAGAACGCCGCCAAAGCTAGCCGCAAGAAGCTGAAG
CGTGTCAGGGAAGAGGGAGATGAAGAAGGTGAAGGTGACGAGGCAGAAGATGAGGAGCAGAGGGGGCCTG
AGCTCAAGCAAGCCTCTCGCCGAGACATGTACACCATCTGCCAGAGTGCTGGGCTAGATGGCCTGGCCAA
AAAGTTTGGGCTTACTCCCGAGCAGTTTGGGGAGAACCTGCGGGATAGCTACCAGCGGCACGAGACAGAG
CAGTTTCCCGCGGAGCCCTTGGAGCTGGCCAAGGATTACGTTTGCAGCCAGTTCCCTACTCCAGAAGCTG
TGCTAGAAGGCGCCCGCTACATGGTAGCCCTGCAGATTGCCCGTGAGCCCCTTGTCCGGCAGGTGCTGAG
GCAAACCTTCCAAGAGAGAGCCAAGTTAAATATAACCCCCACCAAGAAAGGTAGAAAGGATGTGGATGAG
GCCCACTATGCCTATTCCTTCAAGTATTTAAAGAACAAGCCTGTTAAGGAACTGAGAGATGACCAGTTTC
TCAAGATATGCCTGGCTGAAGACGAAGGGCTCCTCACCACTGACATCAGCATAGATTTGAAGGGAGTGGA
AGGCTATGGCAACGACCAGACATATTTTGAGGAGATAAAACAGTTTTACTACCGAGATGAGTTCAGCCAC
CAGGTGCAGGAGTGGAACCGGCAGCGCACCATGGCCATCGAACGGGCTTTACAGCAGTTCCTCTATGTGC
AGATGGCCAAAGAACTCAAGAACAAGCTGCTGGCTGAAGCCAAGGAATATGTCATAAAGGCCTGTAGTCG
AAAGCTCTACAATTGGTTGAGAGTGGCACCCTACCGACCAGATCAGCAGGTGGAAGAAGATGACGACTTT
ATGGACGAGAACCAAGGGAAGGGCATTCGAGTCCTCGGCATTGCTTTCTCCTCTGCCAGAGATCACCCTG
TGTTCTGCGCCCTGGTCAATGGTGAAGGAGAAGTGACAGACTTCCTTCGACTGCCCCATTTTACCAAACG
GCGAACTGCATGGAGAGAGGAAGAGCGGGAAAAGAAGGCTCAAGACATTGAAACGCTAAAGAAATTTCTC
CTGAATAAGAAGCCTCATGTAGTGACAGTTGCAGGAGAGAACAGGGACGCCCAGATGTTGATTGAAGATG
TGAAGCGCATTGTACATGAGCTGGACCAGGGCCAGCAGCTGTCATCTATTGGGGTAGAGCTGGTTGACAA
CGAGTTGGCCATTCTCTATATGAACAGCAAGAAGTCAGAGGCAGAGTTCCGGGATTATCCTCCAGTGCTG
AGACAGGCCGTCTCCCTGGCCCGGCGCATCCAGGACCCTCTGATTGAATTTGCCCAGGTGTGCAGTTCCG
ATGAAGACATCCTGTGTCTCAAGTTTCACCCCTTGCAGGAGCATGTGGTGAAAGAGGAGCTGCTCAACGC
CTTGTACTGTGAATTTATCAACCGAGTCAATGAGGTCGGGGTCGATGTCAACCGTGCCATTGCCCACCCT
TACAGCCAGGCCTTGATCCAGTATGTTTGTGGCCTGGGACCTCGGAAAGGGACCCACCTCCTGAAGATCC
TGAAGCAGAACAACACCCGGCTCGAGAGCCGGACCCAGCTGGTCACCATGTGCCACATGGGTCCCAAAGT
CTTCATGAATTGTGCTGGCTTCCTCAAGATCGACACGGCCTCCCTGGGGGACAGCACTGACTCATATATT
GAAGTCCTTGATGGTTCCCGTGTCCACCCTGAGACTTATGAGTGGGCTAGGAAGATGGCAGTGGATGCCC
TGGAATACGATGAATCAGCCGAGGATGCCAATCCTGCAGGAGCCCTTGAAGAAATCTTGGAAAACCCAGA
GCGACTGAAAGACCTGGACCTTGATGCCTTTGCAGAAGAGCTGGAGAGGCAGGGCTATGGTGACAAACAC
ATCACACTCTATGACATCCGGGCAGAGCTGAGCTGTCGATATAAGGACCTCCGGACAGCCTACCGCTCTC
CCAACACAGAGGAGATCTTCAATATGTTAACCAAAGAAACACCAGAGACCTTCTACATTGGAAAGCTCAT
CATCTGCAATGTCACTGGCATTGCCCACAGGCGTCCCCAGGGTGAGAGCTATGACCAGGCGATCCGCAAT
GATGAGACAGGGCTGTGGCAGTGCCCCTTCTGTCAGCAGGACAATTTCCCTGAACTAAGCGAGGTGTGGA
ACCACTTTGACAGCGGTTCGTGCCCAGGCCAGGCCATCGGTGTCAAAACACGGCTAGACAATGGTGTCAC
CGGCTTCATCCCCACCAAATTCCTCAGTGACAAAGTGGTAAAGCGGCCAGAAGAACGAGTGAAGGTGGGA
ATGACTGTTCACTGCCGCATCATGAAGATTGACATTGAGAAGTTCAGTGCAGACCTGACCTGCCGCACCT
CAGACCTCATGGACAGGAACAATGAGTGGAAGCTGCCCAAAGACACCTACTATGACTTTGATGCTGAAGC
TGCAGACCACAAGCAGGAGGAGGACATGAAGCGGAAGCAGCAGCGGACCACATACATCAAGAGAGTGATC
GCACACCCATCCTTCCATAATATCAATTTCAAGCAAGCAGAAAAGATGATGGAGACCATGGACCAGGGTG
ATGTGATTATCCGACCAAGCAGCAAGGGCGAGAACCACCTGACAGTGACCTGGAAAGTCAGTGATGGCAT
CTACCAGCATGTGGATGTGCGGGAGGAGGGCAAGGAAAATGCCTTCAGCCTGGGAGCCACTCTGTGGATC
AACAGTGAGGAATTCGAAGATTTGGATGAGATTGTTGCTCGCTATGTCCAGCCCATGGCATCCTTTGCCC
GGGACCTTCTGAATCACAAGTATTATCAGGACTGCAGCGGTGGGGACCGCAAGAAATTAGAGGAGCTGCT
CATCAAAACTAAGAAGGAGAAGCCCACCTTCATCCCTTATTTCATCTGTGCCTGCAAGGAACTGCCCGGC
AAGTTCCTACTGGGATACCAGCCCCGGGGTAAACCCAGGATAGAATATGTAACGGTGACTCCAGAGGGAT
TCCGGTACCGGGGCCAGATCTTCCCAACCGTGAATGGACTGTTTAGATGGTTTAAGGATCACTACCAGGA
TCCTGTACCAGGCATCACCCCTAGCAGCAGCAGCAGGACCCGGACACCTGCCTCTATCAATGCTACCCCA
GCCAACATCAACCTTGCAGATCTGACACGGGCTGTGAATGCCCTGCCTCAGAACATGACTTCACAGATGT
TCAGTGCCATTGCTGCGGTGACAGGCCAAGGACAGAACCCTAATGCCACCCCAGCCCAGTGGGCCTCCAG
CCAGTACGGCTATGGCGGCAGTGGAGGCGGCAGCAGTGCTTACCACGTATTCCCAACGCCAGCCCAGCAG
CCAGTGGCCACACCACTAATGACCCCTAGCTACTCCTACACGACCCCAAGCCAGCCCATCACCACCCCTC
AGTACCACCAGCTCCAGGCCAGCACCACCCCACAGTCGGCCCAGGCCCAGCCCCAGCCCTCTTCCAGCTC
CCGGCAACGGCAGCAGCAGCCAAAGTCCAACAGCCATGCAGCCATCGACTGGGGAAAAATGGCGGAGCAG
TGGCTGCAGGAAAAGGAGGCAGAACGGCGGAAACAGAAGCAGCGGCTGACACCTCGGCCCTCCCCCAGCC
CCATGATCGAAAGCACCCCCATGTCCATTGCTGGCGATGCCACCCCACTCCTGGACGAGATGGATCGGTA
G

Translation (1726 aa):
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFINDDDDEDEGEED
EGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRRVKKMSDDEDDDEEEYGKEEH
EKEAIAEEIFQDGEGEEGQEAMEAPMAPPEEEEEDDEESDIDDFIVDDDGQPLKKPKWRKKLPGYTDAAL
QEAQEIFGVDFDYDEFEKYNEYDEELEEEYEYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESS
HLTDQDNEIRATDLPERFQLRSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPASSFSR
KGPSTIQKIKEALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAKASRKKLK
RVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFGLTPEQFGENLRDSYQRHETE
QFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDE
AHYAYSFKYLKNKPVKELRDDQFLKICLAEDEGLLTTDISIDLKGVEGYGNDQTYFEEIKQFYYRDEFSH
QVQEWNRQRTMAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDF
MDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSEAEFRDYPPVL
RQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHP
YSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYI
EVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKH
ITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRN
DETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQQRTTYIKRVI
AHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENAFSLGATLWI
NSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPG
KFLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATP
ANINLADLTRAVNALPQNMTSQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQ
PVATPLMTPSYSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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