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Report for CCDS4307.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4307.1 Public Homo sapiens 5 RPS14 24 110 108 CCDS HistoryNCBI Gene:6208Re-query CCDS DB by CCDS ID:4307.1Re-query CCDS DB by GeneID:6208See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4307.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000312037.6 ENSP00000311028.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000312037.6Link to Ensembl Protein Viewer:ENSP00000311028.5Re-query CCDS DB by Nucleotide ID:ENST00000312037Re-query CCDS DB by Protein ID:ENSP00000311028
Original member Current member EBI ENST00000407193.7 ENSP00000385425.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000407193.7Link to Ensembl Protein Viewer:ENSP00000385425.1Re-query CCDS DB by Nucleotide ID:ENST00000407193Re-query CCDS DB by Protein ID:ENSP00000385425
Original member Current member EBI ENST00000401695.8 ENSP00000385958.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000401695.8Link to Ensembl Protein Viewer:ENSP00000385958.3Re-query CCDS DB by Nucleotide ID:ENST00000401695Re-query CCDS DB by Protein ID:ENSP00000385958
Original member Current member EBI ENST00000521466.5 ENSP00000428509.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000521466.5Link to Ensembl Protein Viewer:ENSP00000428509.1Re-query CCDS DB by Nucleotide ID:ENST00000521466Re-query CCDS DB by Protein ID:ENSP00000428509
Original member Current member NCBI NM_001025070.2 NP_001020241.1 Accepted alive Link to Nucleotide Sequence:NM_001025070.2Link to Protein Sequence:NP_001020241.1Re-query CCDS DB by Nucleotide ID:NM_001025070Re-query CCDS DB by Protein ID:NP_001020241Link to BLAST:NP_001020241.1
Original member Current member NCBI NM_001025071.2 NP_001020242.1 Accepted alive Link to Nucleotide Sequence:NM_001025071.2Link to Protein Sequence:NP_001020242.1Re-query CCDS DB by Nucleotide ID:NM_001025071Re-query CCDS DB by Protein ID:NP_001020242Link to BLAST:NP_001020242.1
Original member Current member NCBI NM_005617.4 NP_005608.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005617.4Link to Protein Sequence:NP_005608.1Re-query CCDS DB by Nucleotide ID:NM_005617Re-query CCDS DB by Protein ID:NP_005608Link to BLAST:NP_005608.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001020241.1 151 P62263 151 100% 0 0
NP_001020242.1 151 P62263 151 100% 0 0
NP_005608.1 151 P62263 151 100% 0 0

Chromosomal Locations for CCDS 4307.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 150444286 150444353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 150445609 150445685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 150446802 150446963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 150447585 150447733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (456 nt):
ATGGCACCTCGAAAGGGGAAGGAAAAGAAGGAAGAACAGGTCATCAGCCTCGGACCTCAGGTGGCTGAAG
GAGAGAATGTATTTGGTGTCTGCCATATCTTTGCATCCTTCAATGACACTTTTGTCCATGTCACTGATCT
TTCTGGCAAGGAAACCATCTGCCGTGTGACTGGTGGGATGAAGGTAAAGGCAGACCGAGATGAATCCTCA
CCATATGCTGCTATGTTGGCTGCCCAGGATGTGGCCCAGAGGTGCAAGGAGCTGGGTATCACCGCCCTAC
ACATCAAACTCCGGGCCACAGGAGGAAATAGGACCAAGACCCCTGGACCTGGGGCCCAGTCGGCCCTCAG
AGCCCTTGCCCGCTCGGGTATGAAGATCGGGCGGATTGAGGATGTCACCCCCATCCCCTCTGACAGCACT
CGCAGGAAGGGGGGTCGCCGTGGTCGCCGTCTGTGA

Translation (151 aa):
MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESS
PYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST
RRKGGRRGRRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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