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Report for CCDS13451.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13451.1 Public Homo sapiens 20 AURKA 24 110 108 CCDS HistoryNCBI Gene:6790Re-query CCDS DB by CCDS ID:13451.1See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13451.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000347343.6 ENSP00000216911.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000347343.6Link to Ensembl Protein Viewer:ENSP00000216911.2Re-query CCDS DB by Nucleotide ID:ENST00000347343Re-query CCDS DB by Protein ID:ENSP00000216911
Original member Current member EBI ENST00000312783.10 ENSP00000321591.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000312783.10Link to Ensembl Protein Viewer:ENSP00000321591.6Re-query CCDS DB by Nucleotide ID:ENST00000312783Re-query CCDS DB by Protein ID:ENSP00000321591
Original member Current member EBI ENST00000371356.6 ENSP00000360407.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371356.6Link to Ensembl Protein Viewer:ENSP00000360407.2Re-query CCDS DB by Nucleotide ID:ENST00000371356Re-query CCDS DB by Protein ID:ENSP00000360407
Original member Current member EBI ENST00000395911.5 ENSP00000379247.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395911.5Link to Ensembl Protein Viewer:ENSP00000379247.1Re-query CCDS DB by Nucleotide ID:ENST00000395911Re-query CCDS DB by Protein ID:ENSP00000379247
Original member Current member EBI ENST00000395913.7 ENSP00000379249.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395913.7Link to Ensembl Protein Viewer:ENSP00000379249.3Re-query CCDS DB by Nucleotide ID:ENST00000395913Re-query CCDS DB by Protein ID:ENSP00000379249
Original member Current member EBI ENST00000395914.5 ENSP00000379250.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395914.5Link to Ensembl Protein Viewer:ENSP00000379250.1Re-query CCDS DB by Nucleotide ID:ENST00000395914Re-query CCDS DB by Protein ID:ENSP00000379250
Original member Current member EBI ENST00000395915.8 ENSP00000379251.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395915.8Link to Ensembl Protein Viewer:ENSP00000379251.3Re-query CCDS DB by Nucleotide ID:ENST00000395915Re-query CCDS DB by Protein ID:ENSP00000379251
Original member Current member NCBI NM_001323303.2 NP_001310232.1 Accepted alive Link to Nucleotide Sequence:NM_001323303.2Link to Protein Sequence:NP_001310232.1Re-query CCDS DB by Nucleotide ID:NM_001323303Re-query CCDS DB by Protein ID:NP_001310232Link to BLAST:NP_001310232.1
Original member Current member NCBI NM_001323304.2 NP_001310233.1 Accepted alive Link to Nucleotide Sequence:NM_001323304.2Link to Protein Sequence:NP_001310233.1Re-query CCDS DB by Nucleotide ID:NM_001323304Re-query CCDS DB by Protein ID:NP_001310233Link to BLAST:NP_001310233.1
Original member Current member NCBI NM_001323305.2 NP_001310234.1 Accepted alive Link to Nucleotide Sequence:NM_001323305.2Link to Protein Sequence:NP_001310234.1Re-query CCDS DB by Nucleotide ID:NM_001323305Re-query CCDS DB by Protein ID:NP_001310234Link to BLAST:NP_001310234.1
Original member Current member NCBI NM_003600.4 NP_003591.2 Accepted alive Link to Nucleotide Sequence:NM_003600.4Link to Protein Sequence:NP_003591.2Re-query CCDS DB by Nucleotide ID:NM_003600Re-query CCDS DB by Protein ID:NP_003591Link to BLAST:NP_003591.2
Original member Current member NCBI NM_198433.3 NP_940835.1 Accepted alive Link to Nucleotide Sequence:NM_198433.3Link to Protein Sequence:NP_940835.1Re-query CCDS DB by Nucleotide ID:NM_198433Re-query CCDS DB by Protein ID:NP_940835Link to BLAST:NP_940835.1
Original member Current member NCBI NM_198434.3 NP_940836.1 Accepted alive Link to Nucleotide Sequence:NM_198434.3Link to Protein Sequence:NP_940836.1Re-query CCDS DB by Nucleotide ID:NM_198434Re-query CCDS DB by Protein ID:NP_940836Link to BLAST:NP_940836.1
Original member Current member NCBI NM_198435.3 NP_940837.1 Accepted alive Link to Nucleotide Sequence:NM_198435.3Link to Protein Sequence:NP_940837.1Re-query CCDS DB by Nucleotide ID:NM_198435Re-query CCDS DB by Protein ID:NP_940837Link to BLAST:NP_940837.1
Original member Current member NCBI NM_198436.3 NP_940838.1 Accepted alive Link to Nucleotide Sequence:NM_198436.3Link to Protein Sequence:NP_940838.1Re-query CCDS DB by Nucleotide ID:NM_198436Re-query CCDS DB by Protein ID:NP_940838Link to BLAST:NP_940838.1
Original member Current member NCBI NM_198437.3 NP_940839.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198437.3Link to Protein Sequence:NP_940839.1Re-query CCDS DB by Nucleotide ID:NM_198437Re-query CCDS DB by Protein ID:NP_940839Link to BLAST:NP_940839.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001310232.1 403 O14965 403 100% 0 0
NP_001310233.1 403 O14965 403 100% 0 0
NP_001310234.1 403 O14965 403 100% 0 0
NP_003591.2 403 O14965 403 100% 0 0
NP_940835.1 403 O14965 403 100% 0 0
NP_940836.1 403 O14965 403 100% 0 0
NP_940837.1 403 O14965 403 100% 0 0
NP_940838.1 403 O14965 403 100% 0 0
NP_940839.1 403 O14965 403 100% 0 0

Chromosomal Locations for CCDS 13451.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 56370158 56370340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 56370485 56370659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 56373408 56373556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 56381433 56381571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 56382985 56383176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 56384270 56384324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 56386257 56386533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 56388156 56388197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1212 nt):
ATGGACCGATCTAAAGAAAACTGCATTTCAGGACCTGTTAAGGCTACAGCTCCAGTTGGAGGTCCAAAAC
GTGTTCTCGTGACTCAGCAATTTCCTTGTCAGAATCCATTACCTGTAAATAGTGGCCAGGCTCAGCGGGT
CTTGTGTCCTTCAAATTCTTCCCAGCGCATTCCTTTGCAAGCACAAAAGCTTGTCTCCAGTCACAAGCCG
GTTCAGAATCAGAAGCAGAAGCAATTGCAGGCAACCAGTGTACCTCATCCTGTCTCCAGGCCACTGAATA
ACACCCAAAAGAGCAAGCAGCCCCTGCCATCGGCACCTGAAAATAATCCTGAGGAGGAACTGGCATCAAA
ACAGAAAAATGAAGAATCAAAAAAGAGGCAGTGGGCTTTGGAAGACTTTGAAATTGGTCGCCCTCTGGGT
AAAGGAAAGTTTGGTAATGTTTATTTGGCAAGAGAAAAGCAAAGCAAGTTTATTCTGGCTCTTAAAGTGT
TATTTAAAGCTCAGCTGGAGAAAGCCGGAGTGGAGCATCAGCTCAGAAGAGAAGTAGAAATACAGTCCCA
CCTTCGGCATCCTAATATTCTTAGACTGTATGGTTATTTCCATGATGCTACCAGAGTCTACCTAATTCTG
GAATATGCACCACTTGGAACAGTTTATAGAGAACTTCAGAAACTTTCAAAGTTTGATGAGCAGAGAACTG
CTACTTATATAACAGAATTGGCAAATGCCCTGTCTTACTGTCATTCGAAGAGAGTTATTCATAGAGACAT
TAAGCCAGAGAACTTACTTCTTGGATCAGCTGGAGAGCTTAAAATTGCAGATTTTGGGTGGTCAGTACAT
GCTCCATCTTCCAGGAGGACCACTCTCTGTGGCACCCTGGACTACCTGCCCCCTGAAATGATTGAAGGTC
GGATGCATGATGAGAAGGTGGATCTCTGGAGCCTTGGAGTTCTTTGCTATGAATTTTTAGTTGGGAAGCC
TCCTTTTGAGGCAAACACATACCAAGAGACCTACAAAAGAATATCACGGGTTGAATTCACATTCCCTGAC
TTTGTAACAGAGGGAGCCAGGGACCTCATTTCAAGACTGTTGAAGCATAATCCCAGCCAGAGGCCAATGC
TCAGAGAAGTACTTGAACACCCCTGGATCACAGCAAATTCATCAAAACCATCAAATTGCCAAAACAAAGA
ATCAGCTAGCAAACAGTCTTAG

Translation (403 aa):
MDRSKENCISGPVKATAPVGGPKRVLVTQQFPCQNPLPVNSGQAQRVLCPSNSSQRIPLQAQKLVSSHKP
VQNQKQKQLQATSVPHPVSRPLNNTQKSKQPLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLG
KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL
EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH
APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD
FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESASKQS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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