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Report for CCDS24147.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24147.1 Public Mus musculus 10 Dusp6 23 108 98 CCDS HistoryNCBI Gene:67603Re-query CCDS DB by CCDS ID:24147.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24147.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020118.4 ENSMUSP00000020118.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020118.4Link to Ensembl Protein Viewer:ENSMUSP00000020118.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000020118Re-query CCDS DB by Protein ID:ENSMUSP00000020118
Original member Current member NCBI NM_026268.3 NP_080544.1 Accepted alive Link to Nucleotide Sequence:NM_026268.3Link to Protein Sequence:NP_080544.1Re-query CCDS DB by Nucleotide ID:NM_026268Re-query CCDS DB by Protein ID:NP_080544Link to BLAST:NP_080544.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080544.1 381 Q9DBB1 381 100% 0 0

Chromosomal Locations for CCDS 24147.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 99263692 99264091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 99264544 99264981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 99265992 99266299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1146 nt):
ATGATAGATACGCTCAGACCCGTGCCCTTCGCGTCGGAAATGGCGATCTGCAAGACGGTGTCGTGGCTCA
ACGAGCAGCTGGAGCTGGGCAACGAACGGCTTCTGCTGATGGACTGCCGACCACAGGAGCTGTACGAGTC
GTCACACATCGAATCTGCCATTAATGTGGCCATCCCCGGCATCATGCTGCGGCGTCTGCAGAAGGGCAAC
CTGCCCGTGCGTGCGCTCTTCACGCGCTGCGAGGACCGGGACCGCTTTACCAGGCGCTGCGGCACCGACA
CCGTGGTGCTGTACGACGAGAATAGCAGCGACTGGAATGAGAACACTGGTGGAGAGTCGGTCCTCGGGCT
GCTGCTCAAGAAACTCAAAGACGAGGGCTGCCGGGCGTTCTACCTGGAAGGTGGCTTCAGTAAGTTCCAG
GCCGAGTTCGCCCTGCACTGCGAGACCAATCTAGACGGCTCGTGCAGCAGCAGTTCCCCGCCTTTGCCAG
TGCTGGGGCTCGGGGGCCTGCGGATCAGCTCGGACTCTTCCTCGGACATTGAGTCTGACCTTGACCGAGA
CCCCAATAGTGCAACGGACTCTGATGGCAGCCCGCTGTCCAACAGCCAGCCTTCCTTCCCGGTGGAGATT
TTGCCCTTCCTTTACCTGGGCTGTGCCAAGGACTCGACCAACTTGGACGTGTTGGAAGAGTTTGGCATCA
AGTACATCTTGAATGTCACCCCCAATTTGCCCAATCTGTTTGAGAATGCGGGCGAGTTCAAATACAAGCA
AATTCCTATCTCGGATCACTGGAGCCAAAACCTGTCCCAGTTTTTCCCTGAGGCCATTTCTTTCATAGAT
GAAGCCCGAGGCAAAAACTGTGGTGTCCTGGTGCATTGCTTGGCAGGTATCAGCCGCTCTGTCACCGTGA
CAGTGGCGTACCTCATGCAGAAGCTCAACCTGTCCATGAACGATGCTTACGACATTGTTAAGATGAAGAA
GTCCAACATCTCCCCCAACTTCAACTTCATGGGCCAGCTGCTTGACTTCGAAAGGACCCTGGGACTGAGC
AGCCCTTGTGACAACCGTGTCCCCACTCCGCAGCTGTACTTCACCACGCCCTCCAACCAGAACGTCTACC
AGGTGGACTCCCTGCAGTCTACGTGA

Translation (381 aa):
MIDTLRPVPFASEMAICKTVSWLNEQLELGNERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGN
LPVRALFTRCEDRDRFTRRCGTDTVVLYDENSSDWNENTGGESVLGLLLKKLKDEGCRAFYLEGGFSKFQ
AEFALHCETNLDGSCSSSSPPLPVLGLGGLRISSDSSSDIESDLDRDPNSATDSDGSPLSNSQPSFPVEI
LPFLYLGCAKDSTNLDVLEEFGIKYILNVTPNLPNLFENAGEFKYKQIPISDHWSQNLSQFFPEAISFID
EARGKNCGVLVHCLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISPNFNFMGQLLDFERTLGLS
SPCDNRVPTPQLYFTTPSNQNVYQVDSLQST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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