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Report for CCDS29204.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29204.1 Public Mus musculus 18 Fgf1 23 108 98 CCDS HistoryNCBI Gene:14164Re-query CCDS DB by CCDS ID:29204.1Re-query CCDS DB by GeneID:14164See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29204.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000040647.10 ENSMUSP00000045710.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000040647.10Link to Ensembl Protein Viewer:ENSMUSP00000045710.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000040647Re-query CCDS DB by Protein ID:ENSMUSP00000045710
Original member Current member EBI ENSMUST00000115582.7 ENSMUSP00000111245.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000115582.7Link to Ensembl Protein Viewer:ENSMUSP00000111245.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000115582Re-query CCDS DB by Protein ID:ENSMUSP00000111245
Original member Current member EBI ENSMUST00000236630.1 ENSMUSP00000157968.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000236630.1Link to Ensembl Protein Viewer:ENSMUSP00000157968.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000236630Re-query CCDS DB by Protein ID:ENSMUSP00000157968
Original member Current member NCBI NM_010197.3 NP_034327.1 Accepted alive Link to Nucleotide Sequence:NM_010197.3Link to Protein Sequence:NP_034327.1Re-query CCDS DB by Nucleotide ID:NM_010197Re-query CCDS DB by Protein ID:NP_034327Link to BLAST:NP_034327.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034327.1 155 P61148 155 100% 0 0

Chromosomal Locations for CCDS 29204.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 38841927 38842121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 38847047 38847150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 38858546 38858714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (468 nt):
ATGGCTGAAGGGGAGATCACAACCTTCGCAGCCCTGACCGAGAGGTTCAACCTGCCTCTAGGAAACTACA
AAAAGCCCAAACTGCTCTACTGCAGCAACGGGGGCCACTTCTTGAGGATCCTTCCTGATGGCACCGTGGA
TGGGACAAGGGACAGGAGCGACCAGCACATTCAGCTGCAGCTCAGTGCGGAAAGTGCGGGCGAAGTGTAT
ATAAAGGGTACGGAGACCGGCCAGTACTTGGCCATGGACACCGAAGGGCTTTTATACGGCTCGCAGACAC
CAAATGAGGAATGTCTGTTCCTGGAAAGGCTGGAAGAAAACCATTATAACACTTACACCTCCAAGAAGCA
TGCGGAGAAGAACTGGTTTGTGGGCCTCAAGAAGAACGGGAGCTGTAAGCGCGGTCCTCGGACTCACTAT
GGCCAGAAAGCCATCTTGTTTCTGCCCCTCCCGGTGTCTTCTGACTAG

Translation (155 aa):
MAEGEITTFAALTERFNLPLGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQLSAESAGEVY
IKGTETGQYLAMDTEGLLYGSQTPNEECLFLERLEENHYNTYTSKKHAEKNWFVGLKKNGSCKRGPRTHY
GQKAILFLPLPVSSD


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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