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Report for CCDS27282.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27282.1 Public Mus musculus 14 Kctd4 23 108 98 CCDS HistoryNCBI Gene:67516Re-query CCDS DB by CCDS ID:27282.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27282.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000050120.3 ENSMUSP00000061734.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000050120.3Link to Ensembl Protein Viewer:ENSMUSP00000061734.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000050120Re-query CCDS DB by Protein ID:ENSMUSP00000061734
Original member NCBI NM_026214.3 NP_080490.3 Updated not alive Link to Nucleotide Sequence:NM_026214.3Link to Protein Sequence:NP_080490.3Re-query CCDS DB by Nucleotide ID:NM_026214Re-query CCDS DB by Protein ID:NP_080490
Current member NCBI NM_026214.4 NP_080490.3 Accepted alive Link to Nucleotide Sequence:NM_026214.4Link to Protein Sequence:NP_080490.3Re-query CCDS DB by Nucleotide ID:NM_026214Re-query CCDS DB by Protein ID:NP_080490Link to BLAST:NP_080490.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080490.3 259 Q9D7X1 259 100% 0 0

Chromosomal Locations for CCDS 27282.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 75962591 75963370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (780 nt):
ATGGAGCGTAAAATAATCAGAAGAGAAAAGGAAAGGGAGTACGAAGGGAGGCACAACAGCGTGGAAGATG
CCGAGCAAGGCAAGAACTGCAAATCCACGCTGATGACCCTCAACGTTGGTGGATATTTATATATTACTCA
AAAGCAGACACTGACCAAGTACCCAGACACTTTCCTTGAAGGTATCGTAAATGGGAAAATCCTCTGTCCA
TTCGATGCTGATGGCCATTACTTCATAGACAGGGACGGGCTTCTCTTCAGGCATGTCCTAAACTTCCTAC
GAAATGGAGAACTTCTACTACCCGAAGGATTTCGAGAAAATCAACTTCTTGCTCAAGAAGCAGAATTCTT
CCAGCTCAAGGGGCTGGCAGAGGAGGTGAAATCCAGGTGGGAAAAAGAACAGCTGACCCCCCGAGAGACT
ACTTTCTTGGAAATAACAGATAATCACGATCGCTCACAAGGACTGAGAATCTTCTGTAATGCTCCTGATT
TCATATCAAAAATAAAATCTCGCATTGTTCTGGTATCCAAAAGCAGGCTGGATGGGTTTCCAGAGGAGTT
CTCTGTGTCGTCAAATATCATTCAATTTAAATACTTCATCAAGTCTGAGAACGGCACTCGACTTGTACTA
AAGGAAGACAACACCTTTGTCTGCACCTTGGAAACTCTTAAGTTTGAGGCCATAATGATGGCTTTAAAAT
GTGGGTTTAGACTGCTGACTAGCCTGGACTGCTCCAAAGGGTCAATTGTTCACAGCGATGCACTTCATTT
TATCAAGTAA

Translation (259 aa):
MERKIIRREKEREYEGRHNSVEDAEQGKNCKSTLMTLNVGGYLYITQKQTLTKYPDTFLEGIVNGKILCP
FDADGHYFIDRDGLLFRHVLNFLRNGELLLPEGFRENQLLAQEAEFFQLKGLAEEVKSRWEKEQLTPRET
TFLEITDNHDRSQGLRIFCNAPDFISKIKSRIVLVSKSRLDGFPEEFSVSSNIIQFKYFIKSENGTRLVL
KEDNTFVCTLETLKFEAIMMALKCGFRLLTSLDCSKGSIVHSDALHFIK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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