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Report for CCDS79150.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79150.1 Public Mus musculus 12 Serpina10 23 108 98 CCDS HistoryNCBI Gene:217847Re-query CCDS DB by CCDS ID:79150.1Re-query CCDS DB by GeneID:217847See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79150.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000121625.1 ENSMUSP00000113644.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000121625.1Link to Ensembl Protein Viewer:ENSMUSP00000113644.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000121625Re-query CCDS DB by Protein ID:ENSMUSP00000113644
Original member NCBI NM_001301404.1 NP_001288333.1 Updated not alive Link to Nucleotide Sequence:NM_001301404.1Link to Protein Sequence:NP_001288333.1Re-query CCDS DB by Nucleotide ID:NM_001301404Re-query CCDS DB by Protein ID:NP_001288333
Current member NCBI NM_001301404.2 NP_001288333.1 Accepted alive Link to Nucleotide Sequence:NM_001301404.2Link to Protein Sequence:NP_001288333.1Re-query CCDS DB by Nucleotide ID:NM_001301404Re-query CCDS DB by Protein ID:NP_001288333Link to BLAST:NP_001288333.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001288333.1 394 Q8R121-2 394 100% 0 0

Chromosomal Locations for CCDS 79150.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 103616837 103617028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 103624332 103624482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 103626610 103626721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 103628229 103628958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1185 nt):
ATGAGGGTGGCTTCTAGCCTCTTTCTTCCTGTCCTCCTGACAGAGGTGTGGCTGGTGACTAGTTTCAATC
TCAGCTCCCATTCACCAGAGGCTTCCGTTCACCTGGAGTCTCAGGATTATGAGAATCAAACCTGGGAAGA
GTACACACGGACTGATCCCAGGGAGGAGGAGGAGGAGGAGGAGGAAAAGGAGGAAGGCAAGGATGAGGAA
TATTGGCTGAGGGCCAGTCAGCAGCTCTCCAATGAGACTTCAAGCTTTGGGTTCAACCTGCTTCGAAAGA
TCTCCATGAGGCACGACGGCAATGTGATCTTCTCACCTTTTGGCCTGTCTGTGGCCATGGTGAATTTGAT
GCTGGGGACCAAGGGAGAGACCAAAGTCCAGATAGAAAATGGACTCAACCTACAGGCCCTGAGCCAAGCA
GGACCCCTGATCCTTCCAGCCCTCTTCAAGAAGGTCAAAGAGACCTTCTCCAGCAACCGGGACCTGGGCC
TCAGCCAGGGTAGCTTTGCCTTCATCCACAAGGACTTTGATATCAAAGAGACCTATTTCAATCTCTCCAA
GAAGTATTTTGATATAGAGTATGTGTCTATAAATTTTCAAAATTCCTCACAAGCCAGAGGGCTCATAAAC
CACTGCATTGTCAAAGAGACTGAGGGGAAAATCCCCAAGCTTTTTGATGAGATTAATCCTGAAACAAAGT
TAATTCTGGTGGACTACGTCTTGTTCAAAGGAAATGCCACCATGCTAGTGGTCCTCATGGAGAAGACAGG
TGATTACTTGGCCCTGGAGGACTACTTGACCGTGGATCTCGTGGAGACATGGCTGCAGAATATGAAAACC
AGGAAAATGGAGGTCTTCTTTCCCAAGTTCAAGCTGAACCAGAGGTATGAGATGCACGAGCTGCTCAAAC
AGATGGGAATCAGGAGGCTCTTCTCCACCTCAGCTGACCTCAGCGAACTCTCAGCCATGGCAAGAAACCT
TCAGGTGTCCAGGGTTTTACAACAGTCGGTGCTTGAGGTGGATGAAAGGGGAACAGAAGCAGTGTCAGGG
ACGCTGTCAGAGATTATCGCTTACTCCATGCCTCCTGCCATCAAAGTGAACCGGCCTTTTCACTTCATCA
TCTATGAGGAGATGTCCAGGATGCTCCTATTTCTGGGCAGGGTGGTAAACCCCACAGTCCTGTGA

Translation (394 aa):
MRVASSLFLPVLLTEVWLVTSFNLSSHSPEASVHLESQDYENQTWEEYTRTDPREEEEEEEEKEEGKDEE
YWLRASQQLSNETSSFGFNLLRKISMRHDGNVIFSPFGLSVAMVNLMLGTKGETKVQIENGLNLQALSQA
GPLILPALFKKVKETFSSNRDLGLSQGSFAFIHKDFDIKETYFNLSKKYFDIEYVSINFQNSSQARGLIN
HCIVKETEGKIPKLFDEINPETKLILVDYVLFKGNATMLVVLMEKTGDYLALEDYLTVDLVETWLQNMKT
RKMEVFFPKFKLNQRYEMHELLKQMGIRRLFSTSADLSELSAMARNLQVSRVLQQSVLEVDERGTEAVSG
TLSEIIAYSMPPAIKVNRPFHFIIYEEMSRMLLFLGRVVNPTVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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