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Report for CCDS30409.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30409.1 Public Mus musculus X Gprasp1 23 108 98 CCDS HistoryNCBI Gene:67298Re-query CCDS DB by CCDS ID:30409.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30409.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000113144.7 ENSMUSP00000108769.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113144.7Link to Ensembl Protein Viewer:ENSMUSP00000108769.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113144Re-query CCDS DB by Protein ID:ENSMUSP00000108769
Original member Current member EBI ENSMUST00000113145.7 ENSMUSP00000108770.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113145.7Link to Ensembl Protein Viewer:ENSMUSP00000108770.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113145Re-query CCDS DB by Protein ID:ENSMUSP00000108770
Original member Current member EBI ENSMUST00000113147.7 ENSMUSP00000108772.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113147.7Link to Ensembl Protein Viewer:ENSMUSP00000108772.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113147Re-query CCDS DB by Protein ID:ENSMUSP00000108772
Original member Current member EBI ENSMUST00000166554.1 ENSMUSP00000132225.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000166554.1Link to Ensembl Protein Viewer:ENSMUSP00000132225.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000166554Re-query CCDS DB by Protein ID:ENSMUSP00000132225
Original member Current member NCBI NM_001004359.2 NP_001004359.1 Accepted alive Link to Nucleotide Sequence:NM_001004359.2Link to Protein Sequence:NP_001004359.1Re-query CCDS DB by Nucleotide ID:NM_001004359Re-query CCDS DB by Protein ID:NP_001004359Link to BLAST:NP_001004359.1
Original member Current member NCBI NM_001005385.1 NP_001005385.1 Accepted alive Link to Nucleotide Sequence:NM_001005385.1Link to Protein Sequence:NP_001005385.1Re-query CCDS DB by Nucleotide ID:NM_001005385Re-query CCDS DB by Protein ID:NP_001005385Link to BLAST:NP_001005385.1
Original member Current member NCBI NM_026081.5 NP_080357.4 Accepted alive Link to Nucleotide Sequence:NM_026081.5Link to Protein Sequence:NP_080357.4Re-query CCDS DB by Nucleotide ID:NM_026081Re-query CCDS DB by Protein ID:NP_080357Link to BLAST:NP_080357.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004359.1 1347 Q5U4C1-1 1347 100% 0 0
NP_001005385.1 1347 Q5U4C1-1 1347 100% 0 0
NP_080357.4 1347 Q5U4C1-1 1347 100% 0 0

Chromosomal Locations for CCDS 30409.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 135799060 135803103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4044 nt):
ATGACTAGGGCAGAGGTTGAGCCTGGTGCCCAGGCAAAGGCTGAAAATAAGCCTGGGGATGAGAATGCTA
ATGCTGCTGAAGTAGAGCCTGAAGCCCCATTGGTGGTCAGACCCAAGGTTAGGACACAAATCATGACTGG
AGCAAGGCCCAAAGTGAAGCCTAAGGGTACCCCTGGAGCAAGACCTAAAGGTGAAACCAGTACACCAGGT
GGGGCATATGCCAAATGTAAACCTAAGGCAATCCCTATTGCTCGATCCAAGCATGATGCCCAAGTGTGGG
CCCCAAATAAGTTTCGTGGCGAGTCCATGTCAAAGATGGGAAAGCAATGTCAGATCAGTGCTGCAGACCC
TCCACTGCTCAGTAATGATTCTGGGATGGTTGCTCAAGCTAAGTGCCTGCCTGTAGATAGAGAACTTGCT
AATATGGACACTGAGAGTATTCCCAAAAAGGCTAATTCTCCAGCTGGATTCCAGCCTTCCTATGGCTCAG
AGGAGGGAACCAATATGGGGTCCTGGTACCGTGCCAGGCCTGTCCCCAAAGGAGAGGCCTATGAGAATTC
CGATTTCAAATGGGCAGATAAACCCTCAGGAAGTCCCTCCTTTTGGAATAGAGATGAAGCCAGTACAAGA
TTTCGTCCTAGGAAAAGCATGAAGGCCAATAACAGGTTCAGGCATATGGCCAAACAAGAGGCAAATACCA
TGCCTAGGCACAAAAACAAACAAGAGTTCTATAATATTTCCAGTTCTGATTCTGAGGATGAGTCTGGTAA
AACTCCCTGGTTCTGGCCCAAAGACAAGACCAAAGTCTGGTCTAAGCCCAAAGAAGAGCCCAATAGTAGG
TCCTGGTTTAGGTCTAAGAAAGAAGTCCGTGTTGAATCCACTTCTGGGTCTGAATGTGAAAATCCTACAA
AATCTTTGTTTTGGTCTGGAGAAGAGGCTAAATCTAGATCCAAACCCAGAGCCAGGAAAGGGGTCAATAT
GAGGGCCAGGCAGCAGGCCAAGCGAGAAGCTTGCAGTGATGCCATGTCTGGAGCTATAGATACAAATAAG
AAAGAGTCCTGGTTCTTGCCTGAAGAGAAAGCTAATGTTTTTTCAAAGTCTAAGACAAAGAAAGAGCCCA
GAACCAGAGCAGTGCCAAAGGAAGAAGTCAAAACTAAGGCCAGAGCAAGTACCAAGCAAGAAGCCAGGCC
AGAGGAGGAAGTCCTCGTTGGGGCTTGGTTCTGGGACACCCAGGAGTCCACTATGGCAGATAGGATAAGC
ATCAAGACCACTTTTGTAGAGGAGGAGCCCATTGTTGGAGATTGGTTCTGGAGTGAAGAAGAAGCCAGTG
TGGACTCTGAGACCTGTCATACATCCAGACCCAGGGCTAAGGAGGAGCAAGTTAGTAGTTTCTGTTTAGG
GTCTGGAAAGAAGAGCAGTATGGAAAGTGGGCCAAAGGCTACTTCTAAATCTATGCCAGTAGCTAAGGAG
GATGAGGTCGTTATTGGGTCCTGGTTCTGGGCAGATGATGAAGAGATCAACTTACAGGCTGATGACGAGT
CTATTTTTGGATCTTGGTTCTGGGGCACTGGTGAGAACAGCCTTAGATCTGTTGGAGTCAATTGTGAGAA
GATGCCGAAGGCTGGAGAAAAAGAAGTTACTGATTCCTGGTTCTGGGCTGGAGATGTCAATACAGAGGCT
GAGGTTGAAGAACAGGCCAGGTCGGCATCTACAAAAGCAACAATCTTTGTGCCTTGGTTTTGGTCTGAAA
AGCAGCCGAACATGGATTTAGGGTCTGAACCTTGCTCAGATATCATGGCAGGAGCTGAGGAGGAGCCCAT
AATTGGGCCCTGGTTCTGGGCTAAAGTAGATAATAGTGTGGAGGCTGAAGTTAACAGTAAGTCTAGCCTT
GAGGATGAGGAAGAACCCATTAGATCCCCTTGGTTTGGGGCCAGAGAACAAACCGATATGAAGTATGCAG
CTGGTATCAGATACAAGCCTATGGCAGAAGCTGAGGATGCTAACAAAAAGTCTTGTGTCTGGGCAAAAGA
ACCCTGTTTGTATCCTACCAATAGAGAATGCTTGAAATCTACTCTGGGAGAAAAAGAAGACACTGTTGAT
CCATGGCTCTGGTCCAATAATTATCCAAGGACCAAGACCATCACAGGGTCCTGGCTATGGGCTGCAGAAG
AGGGAAATATAGATGATGAGACTGGAGAAAAGATTAAACTACCAACTTTAGAGGACAATGCATTCAATTC
TTGGTTCTGGAAAGAAAATGAAGAAAGCATTGTAGAGGCTCCCAAGAGAGAAGAATTCAGGCCAGAAGCG
GAAGAGGAAGACATTATTGGTTCTTGGTTTTGGGCTGGGGATGAAGACAGGTTTGAGCCAGCTGCTAAGA
TTAATGAAGAGAACAAGATAGCATCTGAAGATGAAGATACAGTTGGATCCTGGTTCTGGGGCAATGAAGA
GGCCAGTCTAGAGGCAGTGAGAAGGGGTACTTTTGAGTCTGCTCCTGGGATTAAGGAAGAGAAAGTTACT
GGGTCATGGTTCTGGACTGATAAGGCCAAAGTAGGGGCTGGGTCCCAGACTGTCGAAACTGGGTCAGAAA
CTGAAGAGGAAGCAATTTTTGAGTCCTTGATCTGGGCTGCAAAAAAGGACAGTATTCAAGCAGGAGTAAA
GCGTGTGTCCAAGCCAAAAGATGACGGTAACATAGCTGTTGGGTCCTGGCTCTGGTCTAGTGACAAGGCC
ACAAAAGAAGCTAAAACTCTGATTGTCAGTGAGGCCAGTCCAGAAAATGGGAAAGAGTCAGTTGTTAAGT
TTGGGTCAAGAGCAAAAGATGAGGTGATTAACAAGACTGGCAGTGGTGACAATTGTAAACATAGTACAGA
AGCTGAAACCATAGTGGGAGCCTGGTTCTGGGAAGGAGATGAAGCTAGCTTTGAATCAAATCCTGTACCT
GTATGCAAGGCCGTTTGTGAACCCGAGTCTTCAGCTGAGCACGAACCTGACCCTTCCCGCAGGCCTCAGA
GCTGGGATGAGGTCACTGTTCAGTTTAAGGCTGGTCCGTGGGGAAAAGCTGGCTTCCCACCCATGAACCC
CTTCAGATTCCCCAAAGAAGCGGCATCTCTGTTTGCAGAAATGTTTGGGGGAAAGCCTAAGCTTGTGGAA
GTTGGTCCAGAAAGGGAGCCTGAACCCCAGTTCCCATTTCAGTATGATCCCTCTTACCGCTCAGTCCGAG
AAATTCGCGAGCATCTTAAGGCCAGGGAAAGTGCACAGCCAGAGAATTGGTCTTGCAACTGCATCCAGTG
TGAGCTTAGAATTGGTTCTGAGGAGTTTGAGGAGCTTCTTTTACTGATGGACAGAAATCGTGATCCTTTT
ATCCATGAGATATCTAAGATTGCAATGGGCATGCGAGGTGCTTCTCAGTTTACCCGGGATTTCATTCGAA
ACTCGGGCGTTGTCTCCCTGATTGAAGCCTTACTTAACTATCCGTCCTCCCGAGTGAGGACAAGGTTTTT
GGAAAATATGGTCCGCATGGCTCCCCCTTATCCAGACCTGAACATGATTGAGACATACGTGTGTCAGATT
TGCGAGGACACCTTTGACTATGACTTGGATTCCCCTGATCAGTTGTCCGGATTGACAATGATTACACACC
TCACTGCTACTTCTGACTATCACAAGGTGGTTGTCAATTACTTGGCTGGGTTTTTCTACTTACTGAATTC
AGGCAATACCAAAACAAGGTTTCATGTTCTGAAACTGCTACTGAATTTGTCTGAAAACCTTGTCATGACA
AAACGCCTACTTGTTACTGATTCGGTGTCAGAATTTATGGACCTTATTAATAGGGAGGAGTCAGATGAAA
ACATTCAAATTGTTCTTGCAATATTTGAGACTATCAGTAAACATATTCAAAAAGAGGCACTGTTTTCTGA
TGATGATGATGATGATGAAGAAGAAGATGCAGTGAATCTTGAACCATTTATTTCTGCATTCCGTGAGGCT
GAAAAAATTGCCAAGGAACTAAAACGCAAACCTGGCAATCAAAAAGCACCCTGA

Translation (1347 aa):
MTRAEVEPGAQAKAENKPGDENANAAEVEPEAPLVVRPKVRTQIMTGARPKVKPKGTPGARPKGETSTPG
GAYAKCKPKAIPIARSKHDAQVWAPNKFRGESMSKMGKQCQISAADPPLLSNDSGMVAQAKCLPVDRELA
NMDTESIPKKANSPAGFQPSYGSEEGTNMGSWYRARPVPKGEAYENSDFKWADKPSGSPSFWNRDEASTR
FRPRKSMKANNRFRHMAKQEANTMPRHKNKQEFYNISSSDSEDESGKTPWFWPKDKTKVWSKPKEEPNSR
SWFRSKKEVRVESTSGSECENPTKSLFWSGEEAKSRSKPRARKGVNMRARQQAKREACSDAMSGAIDTNK
KESWFLPEEKANVFSKSKTKKEPRTRAVPKEEVKTKARASTKQEARPEEEVLVGAWFWDTQESTMADRIS
IKTTFVEEEPIVGDWFWSEEEASVDSETCHTSRPRAKEEQVSSFCLGSGKKSSMESGPKATSKSMPVAKE
DEVVIGSWFWADDEEINLQADDESIFGSWFWGTGENSLRSVGVNCEKMPKAGEKEVTDSWFWAGDVNTEA
EVEEQARSASTKATIFVPWFWSEKQPNMDLGSEPCSDIMAGAEEEPIIGPWFWAKVDNSVEAEVNSKSSL
EDEEEPIRSPWFGAREQTDMKYAAGIRYKPMAEAEDANKKSCVWAKEPCLYPTNRECLKSTLGEKEDTVD
PWLWSNNYPRTKTITGSWLWAAEEGNIDDETGEKIKLPTLEDNAFNSWFWKENEESIVEAPKREEFRPEA
EEEDIIGSWFWAGDEDRFEPAAKINEENKIASEDEDTVGSWFWGNEEASLEAVRRGTFESAPGIKEEKVT
GSWFWTDKAKVGAGSQTVETGSETEEEAIFESLIWAAKKDSIQAGVKRVSKPKDDGNIAVGSWLWSSDKA
TKEAKTLIVSEASPENGKESVVKFGSRAKDEVINKTGSGDNCKHSTEAETIVGAWFWEGDEASFESNPVP
VCKAVCEPESSAEHEPDPSRRPQSWDEVTVQFKAGPWGKAGFPPMNPFRFPKEAASLFAEMFGGKPKLVE
VGPEREPEPQFPFQYDPSYRSVREIREHLKARESAQPENWSCNCIQCELRIGSEEFEELLLLMDRNRDPF
IHEISKIAMGMRGASQFTRDFIRNSGVVSLIEALLNYPSSRVRTRFLENMVRMAPPYPDLNMIETYVCQI
CEDTFDYDLDSPDQLSGLTMITHLTATSDYHKVVVNYLAGFFYLLNSGNTKTRFHVLKLLLNLSENLVMT
KRLLVTDSVSEFMDLINREESDENIQIVLAIFETISKHIQKEALFSDDDDDDEEEDAVNLEPFISAFREA
EKIAKELKRKPGNQKAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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