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Report for CCDS20865.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20865.1 Public Mus musculus 7 Ceacam11 23 108 98 CCDS HistoryNCBI Gene:66996Re-query CCDS DB by CCDS ID:20865.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20865.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000094799.2 ENSMUSP00000092393.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000094799.2Link to Ensembl Protein Viewer:ENSMUSP00000092393.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000094799Re-query CCDS DB by Protein ID:ENSMUSP00000092393
Original member Current member NCBI NM_023289.2 NP_075778.2 Accepted alive Link to Nucleotide Sequence:NM_023289.2Link to Protein Sequence:NP_075778.2Re-query CCDS DB by Nucleotide ID:NM_023289Re-query CCDS DB by Protein ID:NP_075778Link to BLAST:NP_075778.2

Chromosomal Locations for CCDS 20865.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 17972249 17972312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 17973357 17973716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 17975303 17975662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 17978412 17978539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (912 nt):
ATGATGGACTCTCTTGCACTTTCCTGCAAAGACTCTACCTCCTGGCAGGGGATCCTGCTCACAGTCTCCC
TT
TTAACCTGCTGGCTGATTCCAACTACCACCCAGATCACCATTGAATCAGTGCCTCCCATTGCTGTTGA
A
GGGGAAAATGTTCTTCTGTTTGTGCATAACTTGCCAGAGAATGTTCAAACCCTTTCCTGGTACACAGGA
GTT
AAACCACTCAAGAATTGTGAAATTGCAAGTCATGTGACAGCTACCAATTCTACTGTGGTGGGACCTG
CA
CACAGTGGTAGAGAGATTGTACTCAAAAATGGATCTCTGCTGATCAAGAGTACCACCAGAAAAGACTC
A
GGTTATTACACTCTACAAATACTTGATACAACCTCAAGACCTGAATTAATACGTGCAGAATTCTTTGTT
CAC
AGCCCACTTTTAGGCTACAAGAAGCATCTTGCCCCTTCTCAACTCACAATTAAGTTGGTGCCATCTA
GG
GTTGAAGAAAATGACAATATTCTCCTGCAGGTTTATCATCTGCCACAGAAGCTTCAAGGCTTTGCCTG
G
CACAAAGGAGTACTTCCACTTGACCATTTTAAGATAGCAAGCCATTCATTCCTCACCCATTCAACTATG
CTG
GGGAGTGCATATCAAGACAGAGTGATAATATGTAATGATGGAACCCTGGTGCTCTTGAATGTCACTC
AG
AATGACACAGGGCTTTACACCTTCCGAACCATATCTGTGGATTTGAAATCAGAATGGGACATTTTGGA
C
CTCCAAGTAAATAAACCTGGAAATTGGGCTTCACCCAATCTCAGACCAACAAGTAAACCATGGACTTTC
TCG
AAGAGTCGAAGACGAGCGGCAGACATGTGCGATTCTTCCATTACTTCCGTTACTATTCAAAATAAAT
AA


Translation (303 aa):
MMDSLALSCKDSTSWQGILLTVSLLTCWLIPTTTQITIESVPPIAVEGENVLLFVHNLPENVQTLSWYTG
V
KPLKNCEIASHVTATNSTVVGPAHSGREIVLKNGSLLIKSTTRKDSGYYTLQILDTTSRPELIRAEFFV
H
SPLLGYKKHLAPSQLTIKLVPSRVEENDNILLQVYHLPQKLQGFAWHKGVLPLDHFKIASHSFLTHSTM
L
GSAYQDRVIICNDGTLVLLNVTQNDTGLYTFRTISVDLKSEWDILDLQVN
KPGNWASPNLRPTSKPWTF
S
KSRRRAADMCDSSITSVTIQNK




Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser