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Report for CCDS18926.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18926.1 Public Mus musculus 4 Nppb 23 108 98 CCDS HistoryNCBI Gene:18158Re-query CCDS DB by CCDS ID:18926.1Re-query CCDS DB by GeneID:18158See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18926.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000103231.4 ENSMUSP00000099521.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000103231.4Link to Ensembl Protein Viewer:ENSMUSP00000099521.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000103231Re-query CCDS DB by Protein ID:ENSMUSP00000099521
Original member NCBI NM_008726.5 NP_032752.1 Updated not alive Link to Nucleotide Sequence:NM_008726.5Link to Protein Sequence:NP_032752.1Re-query CCDS DB by Nucleotide ID:NM_008726Re-query CCDS DB by Protein ID:NP_032752
Current member NCBI NM_008726.6 NP_032752.1 Accepted alive Link to Nucleotide Sequence:NM_008726.6Link to Protein Sequence:NP_032752.1Re-query CCDS DB by Nucleotide ID:NM_008726Re-query CCDS DB by Protein ID:NP_032752Link to BLAST:NP_032752.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032752.1 121 P40753-1 121 100% 0 0

Chromosomal Locations for CCDS 18926.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 147985976 147986101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 147986296 147986518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 147986962 147986978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (366 nt):
ATGGATCTCCTGAAGGTGCTGTCCCAGATGATTCTGTTTCTGCTTTTCCTTTATCTGTCACCGCTGGGAG
GTCACTCCTATCCTCTGGGAAGTCCTAGCCAGTCTCCAGAGCAATTCAAGATGCAGAAGCTGCTGGAGCT
GATAAGAGAAAAGTCGGAGGAAATGGCCCAGAGACAGCTCTTGAAGGACCAAGGCCTCACAAAAGAACAC
CCAAAAAGAGTCCTTCGGTCTCAAGGCAGCACCCTCCGGGTCCAGCAGAGACCTCAAAATTCCAAGGTGA
CACATATCTCAAGCTGCTTTGGGCACAAGATAGACCGGATCGGATCCGTCAGTCGTTTGGGCTGTAACGC
ACTGAAGTTGTTGTAG

Translation (121 aa):
MDLLKVLSQMILFLLFLYLSPLGGHSYPLGSPSQSPEQFKMQKLLELIREKSEEMAQRQLLKDQGLTKEH
PKRVLRSQGSTLRVQQRPQNSKVTHISSCFGHKIDRIGSVSRLGCNALKLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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