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Report for CCDS15827.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15827.1 Public Mus musculus 2 Vav2 23 108 98 CCDS HistoryNCBI Gene:22325Re-query CCDS DB by CCDS ID:15827.1Re-query CCDS DB by GeneID:22325See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15827.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000056176.7 ENSMUSP00000062782.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000056176.7Link to Ensembl Protein Viewer:ENSMUSP00000062782.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000056176Re-query CCDS DB by Protein ID:ENSMUSP00000062782
Original member Current member NCBI NM_009500.2 NP_033526.1 Accepted alive Link to Nucleotide Sequence:NM_009500.2Link to Protein Sequence:NP_033526.1Re-query CCDS DB by Nucleotide ID:NM_009500Re-query CCDS DB by Protein ID:NP_033526Link to BLAST:NP_033526.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033526.1 868 Q60992 868 100% 0 0

Chromosomal Locations for CCDS 15827.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 27264164 27264211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27267230 27267384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27268151 27268237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27268899 27269022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27270128 27270215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27271775 27271891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27273688 27273740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27275000 27275074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27277216 27277343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27278597 27278618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27279191 27279207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27281901 27281989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27282289 27282390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27283309 27283418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27285633 27285765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27286439 27286524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27288606 27288692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27291350 27291418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27291809 27291904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27292670 27292769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27296123 27296223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27297668 27297736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27299374 27299472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27302008 27302110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27318928 27318996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27336680 27336738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27386490 27386606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27426276 27426479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2607 nt):
ATGGAGCAGTGGCGGCAATGCGGCCGCTGGCTCATCGACTGCAAGGTCCTGCCGCCCAACCACCGCGTCG
TGTGGCCCTCGGCGGTGGTCTTCGACCTGGCGCAGGCGCTGCGCGACGGCGTCCTTCTGTGCCAGCTGCT
GCACAACCTCTCCCCCGGTTCCATCGACCTTAAGGACATCAACTTCCGGCCGCAGATGTCCCAGTTCTTG
TGTCTGAAGAATATTCGCACCTTCCTCAAAGTCTGCCATGACAAATTTGGACTAAGAAACAGTGAGCTGT
TTGACCCTTTCGACCTCTTTGATGTCCGAGACTTCGGGAAGGTCATCTCTGCAGTGTCCCGTCTGTCCCT
GCACAGCATCGCACAGAGCAAAGGGATCAGGCCATTTCCATCAGAGGAGACAGCTGAAAATGATGACGAC
GTCTACCGGAGCCTGGAAGAGCTGGCTGACGAGCATGACCTGGGTGAGGACATCTACGACTGTGTCCCGT
GTGAAGATGAAGGAGATGACATTTATGAGGACATCATCAAGGTGGAGGTGCAGCAGCCCATGAAAATGGG
CATGACTGAGGACGACAAGAGAAGCTGCTGCTTGTTAGAGATTCAGGAGACCGAGGCCAAGTACTACCGC
ACCCTGGAGGACATTGAGAAGAACTACATGGGTCCCTTGCGGCTGGTGCTGAGCCCGGCGGATATGGCTG
CTGTCTTCATCAACCTGGAGGACCTCATCAAGGTGCATCACAGCTTTCTGCGAGCCATCGATGTGTCCAT
GATGGCTGGTGGCAGTACCCTGGCTAAGGTCTTTCTGGAGTTTAAGGAAAGGCTCCTGATCTATGGAGAG
TACTGTAGCCACATGGAACACGCTCAGAGTACACTGAACCAGCTCCTCGCCAGCCGAGAGGACTTCAGGC
AGAAAGTGGAGGAGTGCACACTCAGGGTTCAGGATGGCAAGTTCAAGCTGCAAGACCTGCTGGTGGTGCC
CATGCAACGGGTGCTGAAGTACCACCTGCTGCTCAAGGAGCTCCTGAGCCATTCTGCAGACCGACCAGAA
AGACAACAGCTCAAAGAAGCCCTGGAAGCCATGCAGGACTTGGCCATGTACATCAATGAAGTGAAGCGGG
ACAAGGAGACCTTGAAGAAGATTAGCGAGTTCCAGTGCTCCATAGAAAACCTGCAAGTGAAGCTGGAGGA
ATTTGGGAGGCCAAAGATTGACGGGGAGCTTAAAGTCCGGTCCATAGTCAACCACACCAAGCAAGACAGG
TACCTGTTCCTATTTGACAAGGTGGTCATCGTGTGCAAGAGGAAGGGCTACAGCTATGAGCTGAAGGAGG
TCATTGAGCTGCTCTTCCACAAGATGACCGATGACCCGATGCACAACAAGGACATCAAGAAGTGGTCCTA
TGGCTTCTACCTGATTCACCTCCAAGGAAAGCAAGGCTTTCAGTTCTTCTGCAAGACGGAAGACATGAAG
CGGAAGTGGATGGAGCAGTTCGAGATGGCCATGTCAAACATCAAGCCAGATAAGGCCAATGCCAACCATC
ATAGCTTCCAGATGTACACATTCGACAAGACTACCAACTGCAAAGCCTGCAAGATGTTTCTCAGGGGTAC
CTTCTACCAGGGATACCTGTGTACCAGATGTGGCGTCGGGGCACACAAGGAATGCCTGGAGGTGATCCCC
CCCTGCAAGATGAGTTCACCTGCAGATGTGGATGCTCCTGGAGCAGGACCAGGTCCCAAGATGGTTGCTG
TGCAGAATTACCATGGTAACCCAGCCCCTCCTGGGAAGCCTGTGTTGACCTTCCAGACAGGAGACGTGAT
AGAACTGCTCCGGGGTGACCCCGATTCTCCTTGGTGGGAAGGGCGGCTGGTTCAAACCAGGAAGTCAGGG
TATTTTCCCAGCTCATCTGTGAAGCCCTGCCCAGTGGATGGAAGGCCGCCTACTGGCCGCCCACCATCCC
GGGAGATCGATTACACTGCCTACCCGTGGTTTGCTGGCAACATGGAACGGCAGCAGACGGACAATCTGCT
CAAGTCTCATGCCAGTGGGACCTACCTCATCAGAGAGCGTCCAGCAGAGGCAGAACGCTTCGCCATCAGC
ATCAAGTTCAATGATGAGGTGAAACATATCAAGGTGGTGGAGAAAGATAGCTGGATCCACATCACGGAAG
CTAAGAAGTTTGAGAGCCTCCTGGAGCTGGTGGAGTACTACCAGTGTCACTCACTCAAGGAAAGCTTCAA
GCAGTTGGACACTACACTCAAGTTCCCCTACAAGTCTCGGGAGCGAACCACCAGCAGGGCCTCAAGCCGG
TCTCCAGCTTCCTGCGCTTCCTACAACTTTTCTTTTCTCAGTCCTCAGGGCCTCAGCTTTGCCCCCCAGG
CCCCTTCTGCTCCCTTCTGGTCAGTGTTCACACCGCGGGTCATCGGCACAGCCGTGGCCAGGTACAACTT
TGCTGCTCGAGACATGCGGGAGCTGTCACTGCGAGAAGGTGATGTGGTGAAGATCTACAGCCGAATTGGT
GGGGACCAGGGCTGGTGGAAAGGAGAGACAAATGGGCGGATCGGTTGGTTTCCTTCGACGTACGTGGAAG
AGGAAGGCGTCCAGTGA

Translation (868 aa):
MEQWRQCGRWLIDCKVLPPNHRVVWPSAVVFDLAQALRDGVLLCQLLHNLSPGSIDLKDINFRPQMSQFL
CLKNIRTFLKVCHDKFGLRNSELFDPFDLFDVRDFGKVISAVSRLSLHSIAQSKGIRPFPSEETAENDDD
VYRSLEELADEHDLGEDIYDCVPCEDEGDDIYEDIIKVEVQQPMKMGMTEDDKRSCCLLEIQETEAKYYR
TLEDIEKNYMGPLRLVLSPADMAAVFINLEDLIKVHHSFLRAIDVSMMAGGSTLAKVFLEFKERLLIYGE
YCSHMEHAQSTLNQLLASREDFRQKVEECTLRVQDGKFKLQDLLVVPMQRVLKYHLLLKELLSHSADRPE
RQQLKEALEAMQDLAMYINEVKRDKETLKKISEFQCSIENLQVKLEEFGRPKIDGELKVRSIVNHTKQDR
YLFLFDKVVIVCKRKGYSYELKEVIELLFHKMTDDPMHNKDIKKWSYGFYLIHLQGKQGFQFFCKTEDMK
RKWMEQFEMAMSNIKPDKANANHHSFQMYTFDKTTNCKACKMFLRGTFYQGYLCTRCGVGAHKECLEVIP
PCKMSSPADVDAPGAGPGPKMVAVQNYHGNPAPPGKPVLTFQTGDVIELLRGDPDSPWWEGRLVQTRKSG
YFPSSSVKPCPVDGRPPTGRPPSREIDYTAYPWFAGNMERQQTDNLLKSHASGTYLIRERPAEAERFAIS
IKFNDEVKHIKVVEKDSWIHITEAKKFESLLELVEYYQCHSLKESFKQLDTTLKFPYKSRERTTSRASSR
SPASCASYNFSFLSPQGLSFAPQAPSAPFWSVFTPRVIGTAVARYNFAARDMRELSLREGDVVKIYSRIG
GDQGWWKGETNGRIGWFPSTYVEEEGVQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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