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Report for CCDS76532.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76532.1 Public Homo sapiens 12 MAGOHB 24 110 108 CCDS HistoryNCBI Gene:55110Re-query CCDS DB by CCDS ID:76532.1Re-query CCDS DB by GeneID:55110See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76532.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000539554.5 ENSP00000437462.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000539554.5Link to Ensembl Protein Viewer:ENSP00000437462.1Re-query CCDS DB by Nucleotide ID:ENST00000539554Re-query CCDS DB by Protein ID:ENSP00000437462
Original member Current member NCBI NM_001300739.2 NP_001287668.1 Accepted alive Link to Nucleotide Sequence:NM_001300739.2Link to Protein Sequence:NP_001287668.1Re-query CCDS DB by Nucleotide ID:NM_001300739Re-query CCDS DB by Protein ID:NP_001287668Link to BLAST:NP_001287668.1
Original member Current member NCBI NM_001319985.2 NP_001306914.1 Accepted alive Link to Nucleotide Sequence:NM_001319985.2Link to Protein Sequence:NP_001306914.1Re-query CCDS DB by Nucleotide ID:NM_001319985Re-query CCDS DB by Protein ID:NP_001306914Link to BLAST:NP_001306914.1

Chromosomal Locations for CCDS 76532.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 10606275 10606374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 10607854 10607936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 10609831 10609941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 10610622 10610636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (309 nt):
ATGATCAGAAAAGAGGCTTATGTGCACAAGAGTGTAATGGAAGAACTGAAGAGAATTATTGATGACAGTG
AAATTACAAAAGAAGATGATGCTTTGTGGCCTCCCCCTGATAGGGTTGGCCGACAGGAGCTTGAAATTGT
AATTGGAGATGAGCACATATCTTTTACCACATCAAAAATAGGTTCTCTTATTGATGTAAATCAGTCAAAG
GATCCTGAAGGCCTTCGAGTATTTTACTATTTGGTACAAGACTTGAAATGTTTAGTTTTCAGTCTTATTG
GATTACACTTCAAGATTAAACCAATTTAA

Translation (102 aa):
MIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSK
DPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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