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Report for CCDS74455.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74455.1 Public Homo sapiens 19 SYT5 24 110 108 CCDS HistoryNCBI Gene:6861Re-query CCDS DB by CCDS ID:74455.1Re-query CCDS DB by GeneID:6861See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74455.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000590851.5 ENSP00000465576.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000590851.5Link to Ensembl Protein Viewer:ENSP00000465576.1Re-query CCDS DB by Nucleotide ID:ENST00000590851Re-query CCDS DB by Protein ID:ENSP00000465576
Original member Current member NCBI NM_001297774.2 NP_001284703.1 Accepted alive Link to Nucleotide Sequence:NM_001297774.2Link to Protein Sequence:NP_001284703.1Re-query CCDS DB by Nucleotide ID:NM_001297774Re-query CCDS DB by Protein ID:NP_001284703Link to BLAST:NP_001284703.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001284703.1 382 O00445-2 382 100% 0 0

Chromosomal Locations for CCDS 74455.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 55173484 55173684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55174517 55174650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55174882 55174996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55175172 55175339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55175709 55175876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55176005 55176124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55178963 55179205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1149 nt):
ATGACTCGCGGTGGCTGTCCGGTTTCTGCGCGGCTGTTCGCGCAAAGGCCTCATGGGAGTTGGAGTTCTT
TGTTGTGCGTGGGGCTCAAAGGACGTCTGGGGTGGGAATGGGGGACTAGGGTGCTTGAGTGTCTCTGCAG
AAAAGACTCCAGGACCCCGCCACCATGTTCCCGGAGCCCCCAACCCCGGGGCCTCCATCGCCCGACACGC
CTCCCGACTCCAGTCGCATCAGCCACGGCCCAGGTGCAGCCAGAAGTAGAGGAGCTGGAGCCAGCACCAT
CCGGGCCAGGGCAGCAGGTGGCAGACAAGCATGAGCTAGGACGACTGCAGTACTCCCTGGATTATGACTT
CCAGAGTGGCCAGCTGCTGGTGGGCATTCTGCAAGCAATGGGATTGGCAGCCTTGGATCTTGGTGGCTCC
TCGGACCCCTATGTGCGGGTCTACCTGCTGCCGGACAAACGGAGGCGGTACGAGACCAAGGTGCATCGGC
AGACGCTGAACCCTCACTTTGGGGAGACCTTCGCCTTCAAGGTCCCCTACGTGGAGCTGGGGGGCAGGGT
GCTGGTCATGGCGGTGTACGACTTCGACCGCTTCTCTCGCAATGACGCCATCGGGGAGGTGCGGGTCCCT
ATGAGCTCCGTGGACCTGGGGCGGCCAGTGCAGGCCTGGCGGGAGCTGCAGGCGGCTCCGCGGGAGGAGG
AGAAGCTTGGGGACATCTGCTTCTCCCTCCGCTATGTCCCCACGGCCGGGAAGCTCACCGTCATCGTCCT
GGAGGCTAAAAACCTGAAGAAGATGGACGTAGGAGGACTGTCAGATCCATACGTCAAGGTCCACCTGCTG
CAGGGCGGCAAAAAGGTGCGGAAGAAGAAAACCACCATCAAGAAGAACACTCTGAACCCCTATTACAACG
AAGCTTTCAGCTTCGAGGTGCCCTGTGACCAAGTCCAGAAGGTGCAGGTGGAGCTGACCGTGCTGGACTA
CGACAAGCTGGGCAAGAACGAGGCCATCGGGAGGGTGGCCGTGGGGGCGGCCGCCGGCGGGGCTGGCCTG
CGGCACTGGGCGGACATGCTGGCCAACCCGCGGCGGCCCATTGCCCAGTGGCACTCGCTGCGGCCCCCGG
ACCGAGTGAGGCTGCTGCCTGCGCCCTGA

Translation (382 aa):
MTRGGCPVSARLFAQRPHGSWSSLLCVGLKGRLGWEWGTRVLECLCRKDSRTPPPCSRSPQPRGLHRPTR
LPTPVASATAQVQPEVEELEPAPSGPGQQVADKHELGRLQYSLDYDFQSGQLLVGILQAMGLAALDLGGS
SDPYVRVYLLPDKRRRYETKVHRQTLNPHFGETFAFKVPYVELGGRVLVMAVYDFDRFSRNDAIGEVRVP
MSSVDLGRPVQAWRELQAAPREEEKLGDICFSLRYVPTAGKLTVIVLEAKNLKKMDVGGLSDPYVKVHLL
QGGKKVRKKKTTIKKNTLNPYYNEAFSFEVPCDQVQKVQVELTVLDYDKLGKNEAIGRVAVGAAAGGAGL
RHWADMLANPRRPIAQWHSLRPPDRVRLLPAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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