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Report for CCDS24534.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24534.1 Public Mus musculus 11 Ranbp17 23 108 98 CCDS HistoryNCBI Gene:66011Re-query CCDS DB by CCDS ID:24534.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24534.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000102815.9 ENSMUSP00000099879.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000102815.9Link to Ensembl Protein Viewer:ENSMUSP00000099879.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000102815Re-query CCDS DB by Protein ID:ENSMUSP00000099879
Original member Current member NCBI NM_023146.3 NP_075635.1 Accepted alive Link to Nucleotide Sequence:NM_023146.3Link to Protein Sequence:NP_075635.1Re-query CCDS DB by Nucleotide ID:NM_023146Re-query CCDS DB by Protein ID:NP_075635Link to BLAST:NP_075635.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075635.1 1088 Q99NF8 1088 100% 0 0

Chromosomal Locations for CCDS 24534.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 33213402 33213498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33217292 33217419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33219171 33219269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33243110 33243276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33264636 33264774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33266110 33266324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33283908 33283990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33289564 33289671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33297342 33297430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33302767 33302870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33318239 33318347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33318428 33318491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33328444 33328524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33329471 33329544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33441803 33441938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33452444 33452549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33474887 33475080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33478164 33478336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33479143 33479289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33481022 33481141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33483006 33483079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33485918 33486083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33487643 33487747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33491327 33491392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33493251 33493417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33500680 33500770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33504682 33504828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 33513602 33513619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3267 nt):
ATGGCGCTGCACTTTCAGAGTTTGGCTGAGTTGGAAGTGCTGTGTACTCATCTCTACGTAGGGACCGATC
TCACTGAAAGAATAGAGGCTGAGAAAGCACTCTTGGAACTGATTGACAGCCCAGAATGTCTCAGCAAGTG
TCAACTTTTACTAGAACAAGGAACAACATCCTATGCTCAGCTCCTTGCAGCAACATGTCTTTCAAAACTT
GTTACCCGAATCAATCCTTTACCTATTGAACAGAGGATAGACATCAGAAACTACATCCTGAATTATGTGG
CGTCCCAACCTAAGCTGGCGCCCTTTGTCATCCAAGCTCTGATTCAAGTCATCGCTAAACTCACCAAGTT
GGGGTGGTTTGAGGTGCAGAAGGATGAGTTTGTTTTCCGAGAAATCATTGCTGATGTGAAGAAGTTCCTC
CAGGGCACGGTGGAACACTGCATAATAGGAGTGATAATCCTTTGTGAATTGACACAGGAAATGAACTTGG
TTGATTATTCCAGACCTTCAGCAAAACATAGGAAAATAGCTACCTCATTCCGTGACACTTCTCTAAAAGA
CATTCTGGTGTTAGCGTGTTCTCTCCTGAAACAGGTGTTGGCCAAACCTTTAAATCTTCAGGATCAAGAT
CAACAGAGTCTGGTAATGCAGGTCTTAAAGCTGGTCCTCAGCTGCCTGAACTTTGACTTCCTGGGCAGTT
CAGCAGACGAATCTGCGGACGATCTTTGCACAGTGCAGATTCCAACAACCTGGAGAACAATTTTCCTAGA
GCCAGAAACATTGGATCTTTTCTTCAATTTGTATCACTCGCTCCCACCACTGCTGTCTCAGTTAGCACTT
TCGTGCTTAGTTCAGTTTGCTTCTACAAGAAGATCCTTATTTAGCAGTCCTGAGCGCGCCAAGTACCTTG
GTAACTTAATTAAAGGGGTGAAAAGGATACTTGAAAACCCCCAGGGTTTGTCTGATCCTGGCAATTATCA
TGAATTCTGTCGATTTTTGGCTCGTTTAAAGACAAACTATCAGCTGGGAGAGTTAGTTTTGGTGAAGGAG
TATGCGGAAGTGATTGGATTAATTGCCAATTTTACTATTACTAGCCTTCAGCATTGGGAGTTTGCCCCCA
ACAGTGTTCATTACTTATTAACTCTGTGGCAGAGGATGGTAGCATCCGTTCCTTTTGTGAAGTCAGCTGA
ACCCCACTTGTTAGACACTTATGCACCTGAAATCACAAAGGCCTTTATCACGTCCCGTTTGGAATCTGTT
GCCATTGTTGTGAGAGATAATTTAGAAGACCCTCTGGATGACACTGCTACCGTGTTCCAGCAGCTGGAGC
AGCTGTGTACAGTTAGCAGATGTGAATATGAAAAGACGTGTACTCTTCTTGTACAGCTATTTGACCAAAA
TGCACAGAACTATCAAAAGCTTCTGCATGCTGCTCCGGGGCTGGCTGTTGACATGGCGATTCAAGAAGGA
CGTCTTGCATGGCTGATCTACTTGGTTGGCACAGTTGTAGGAGGGAGACTAACATATACCAGCACAGATG
AGCATGATGCTATGGATGGAGAACTATCCTGCCGTGTTTTTCAGCTTATATCTTTAATGGATACCAGATT
ACCTCACTGCACCAATGAGAAAATAGAGCTTGCAGTTCTCTGGTTCCTGGATCAGTTTCGTAAAACATAT
GTTGGTGATCAGCTTCAAAGAACCTCAAAGGTGTATGCTCGTATGTCAGAAGTCTTAGGAATAACAGATG
ATAACCATGTTCTGGAAACATTCATGACGAAAATTGTTACAAACCTGAAGTACTGGGGAAGATGTGAGCC
TGTAATCTCCAGGACGCTTCAGTTCCTCAGTGACCTGTCAGTTGGCTATATCCTTTTAAAAAAACTTGTG
AAAATAGATGCTGTGAAATTCATGCTGAAAAATCACACGAGTGAACACTTCCCGTTTCTTGGCATCAGTG
AAACTTACAATGTGGGTGACTTCAGGTGCCGGACAACCTTCTACACAGCCCTCACTCGCCTTCTGATGGT
AGACCTGGGTGAAGATGAGGATGAATTTGAGAATTTTATGCTGCCTCTCACAGTCTCTTTTGAAACAGTG
TTACAAATATTCAACAATAACTTTAAACAGGAAGAAGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATC
TTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATATACCCAGC
CTATCTCCCAGTTCTTCAGAGAGCTATTGAACGGTGGTATGGAGAACCCGCATGTACTACTCCAATCTTA
AAACTCTTGGCAGAACTGATGCAAAACAGGTCTCAGCGTTTGAATTTTGATGTATCCTCTCCTAATGGAA
TTCTTCTCTTCAGAGAAGCCAGCAAAATGATTTGCACCTACGGAAATCAGATCCTGTCTCTTGGAAGTCT
CTCCAAAGATAAGATTTATCCAATGAAACTCAAGGGCATCTCCATCTGCTACTCAGCTCTCAAGTCTGCA
TTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAACCATTTTGACAATGTACTCC
AGGCCTTTGTCAAAATGCTGCTTTCAGTGTCTCACAGTGACTTGCTGCAATACCGGAAGCTGAGCCAGTC
TTACTATCCACTGCTGGAATGTCTCACCCAGGACCACATGAGCTTCATCACCAACTTGGAGCCTCCTGTG
CTCCTGTACGTTCTCACATCTCTCTCAGAGGGACTCACCACACTTGACACAGTGGTCTCCTCCAGCTGCT
GTACAAGTTTAGACTACATGGTCACCTATCTCTTCAAGCACATAGCAAAAGAAGGGAAGAAGCCACTTCG
AAGCAGAGAGGCTATGCAGGCTGGTCAGAGACTGTTACATTTTATGCAACAAAACCCAGATGTTCTGCAG
CAGATGATGTCTGTCCTCATGAACACCATTGTCTTTGAGGATTGTCGGAACCAGTGGTCAGTATCCAGGC
CTCTCCTGGGGCTCATCCTGCTCAACGAGAAGTATTTCAGTGAACTGAGGGCCAGTCTGATAAACAGCCA
GCCTCTCCCCAAGCAGGAAGTCCTTGGCCAGTGCTTCAGGAACTTGATGGAAGGAGTGGAACAGAACCTG
TCTGTCAAGAACAGAGACAGGTTTACCCAGAACCTCTCCGTCTTCAGAAGAGATGTGGCAGAGGCCCTGC
GTAGCGATGGCCACACTGACCTAAGCAGCCTGGACATGATGAGCTGA

Translation (1088 aa):
MALHFQSLAELEVLCTHLYVGTDLTERIEAEKALLELIDSPECLSKCQLLLEQGTTSYAQLLAATCLSKL
VTRINPLPIEQRIDIRNYILNYVASQPKLAPFVIQALIQVIAKLTKLGWFEVQKDEFVFREIIADVKKFL
QGTVEHCIIGVIILCELTQEMNLVDYSRPSAKHRKIATSFRDTSLKDILVLACSLLKQVLAKPLNLQDQD
QQSLVMQVLKLVLSCLNFDFLGSSADESADDLCTVQIPTTWRTIFLEPETLDLFFNLYHSLPPLLSQLAL
SCLVQFASTRRSLFSSPERAKYLGNLIKGVKRILENPQGLSDPGNYHEFCRFLARLKTNYQLGELVLVKE
YAEVIGLIANFTITSLQHWEFAPNSVHYLLTLWQRMVASVPFVKSAEPHLLDTYAPEITKAFITSRLESV
AIVVRDNLEDPLDDTATVFQQLEQLCTVSRCEYEKTCTLLVQLFDQNAQNYQKLLHAAPGLAVDMAIQEG
RLAWLIYLVGTVVGGRLTYTSTDEHDAMDGELSCRVFQLISLMDTRLPHCTNEKIELAVLWFLDQFRKTY
VGDQLQRTSKVYARMSEVLGITDDNHVLETFMTKIVTNLKYWGRCEPVISRTLQFLSDLSVGYILLKKLV
KIDAVKFMLKNHTSEHFPFLGISETYNVGDFRCRTTFYTALTRLLMVDLGEDEDEFENFMLPLTVSFETV
LQIFNNNFKQEEVKRMLIGLARDLRGIAFALNTKTSYTMLFDWIYPAYLPVLQRAIERWYGEPACTTPIL
KLLAELMQNRSQRLNFDVSSPNGILLFREASKMICTYGNQILSLGSLSKDKIYPMKLKGISICYSALKSA
LCGNYVSFGVFKLYGDNHFDNVLQAFVKMLLSVSHSDLLQYRKLSQSYYPLLECLTQDHMSFITNLEPPV
LLYVLTSLSEGLTTLDTVVSSSCCTSLDYMVTYLFKHIAKEGKKPLRSREAMQAGQRLLHFMQQNPDVLQ
QMMSVLMNTIVFEDCRNQWSVSRPLLGLILLNEKYFSELRASLINSQPLPKQEVLGQCFRNLMEGVEQNL
SVKNRDRFTQNLSVFRRDVAEALRSDGHTDLSSLDMMS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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