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Report for CCDS79982.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79982.1 Public Mus musculus 3 Polr3gl 23 108 98 CCDS HistoryNCBI Gene:69870Re-query CCDS DB by CCDS ID:79982.1Re-query CCDS DB by GeneID:69870See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79982.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000145001.1 ENSMUSP00000118943.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000145001.1Link to Ensembl Protein Viewer:ENSMUSP00000118943.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000145001Re-query CCDS DB by Protein ID:ENSMUSP00000118943
Original member Current member NCBI NM_001293701.1 NP_001280630.1 Accepted alive Link to Nucleotide Sequence:NM_001293701.1Link to Protein Sequence:NP_001280630.1Re-query CCDS DB by Nucleotide ID:NM_001293701Re-query CCDS DB by Protein ID:NP_001280630Link to BLAST:NP_001280630.1

Chromosomal Locations for CCDS 79982.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 96578502 96578588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 96579798 96579911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 96580016 96580089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 96580450 96580506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 96580835 96580903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 96581644 96581689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (447 nt):
ATGAGGCAGCTCCCCTACTTCATCCGGCCAGCCGTCCCCAAGAGAGATGTGGAACGTTACTCAGACAAGT
ATCAGATGTCTGGGCCTATTGACAACGCCATCGATTGGAACCCTGATTGGCGGCGACTCCCCAGTGAGCT
CAAGATTCGAGTGCGGAAAGTACAGAAGGAGCGGACCACCATTATCCTTCCCAAGAGGCCCCCTAAGAGC
ACAGACGATAAGGAGGAGACGATACAGAAACTAGAGACGCTAGAGAAGAAGGAGGAGGAAGTGACTTCGG
AGGAGGATGAAGAGAAAGAAGAAGAGGAGGAGAAGGAAGAGGGGGAGGAAGAGGAATACGATGAAGAGGA
GCATGAGGAGGAAACTGATTACATCATGTCATATTTTGACAATGGAGAGGACTTTGGAGGGGACAGCGAT
GACAATATGGATGAGGCCATATACTGA

Translation (148 aa):
MRQLPYFIRPAVPKRDVERYSDKYQMSGPIDNAIDWNPDWRRLPSELKIRVRKVQKERTTIILPKRPPKS
TDDKEETIQKLETLEKKEEEVTSEEDEEKEEEEEKEEGEEEEYDEEEHEEETDYIMSYFDNGEDFGGDSD
DNMDEAIY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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