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Report for CCDS34738.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34738.1 Public Homo sapiens 7 TFEC 24 110 108 CCDS HistoryNCBI Gene:22797Re-query CCDS DB by CCDS ID:34738.1Re-query CCDS DB by GeneID:22797See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34738.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000320239.11 ENSP00000318676.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000320239.11Link to Ensembl Protein Viewer:ENSP00000318676.7Re-query CCDS DB by Nucleotide ID:ENST00000320239Re-query CCDS DB by Protein ID:ENSP00000318676
Original member Current member NCBI NM_001018058.3 NP_001018068.1 Accepted alive Link to Nucleotide Sequence:NM_001018058.3Link to Protein Sequence:NP_001018068.1Re-query CCDS DB by Nucleotide ID:NM_001018058Re-query CCDS DB by Protein ID:NP_001018068Link to BLAST:NP_001018068.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001018068.1 318 O14948-2 318 100% 0 0

Chromosomal Locations for CCDS 34738.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 115940551 115940931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 115941893 115942040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 115950874 115950949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 115954586 115954642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 115956679 115956793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 115984262 115984441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (957 nt):
ATGACCCTTGATCATCAGATCATCAATCCAACTCTTAAATGGTCACAACCTGCAGTGCCAAGTGGTGGGC
CTCTTGTGCAGCATGCACACACAACTCTGGACAGTGATGCTGGCCTCACAGAAAACCCACTCACCAAGTT
ACTAGCTATTGGGAAAGAAGATGACAATGCACAATGGCATTTATCTGGAAGTATTTTGGATGTGTATAGC
GGTGAACAAGGAATTTCACCAATTAACATGGGGCTTACAAGTGCTTCTTGTCCAAGTAGTCTACCAATGA
AAAGAGAAATTACAGAAACTGACACTAGAGCTTTAGCAAAAGAGAGACAAAAAAAGGACAACCACAACCT
CATTGAAAGAAGAAGAAGGTATAATATTAATTACCGAATCAAGGAGCTTGGCACTCTTATTCCAAAGTCT
AATGATCCTGATATGCGCTGGAACAAAGGAACCATTCTAAAAGCATCAGTGGAGTACATCAAGTGGCTAC
AAAAAGAACAACAGAGAGCCCGAGAATTGGAACACAGACAGAAGAAATTAGAGCAGGCTAACAGGCGACT
TCTACTTCGGATTCAGGAACTAGAAATTCAGGCTCGTACTCATGGTCTGCCAACCCTGGCTTCACTTGGC
ACGGTTGATTTAGGTGCTCATGTCACCAAACAGCAGAGCCATCCTGAGCAGAATTCAGTAGACTATTGCC
AACAACTGACTGTGTCTCAGGGGCCAAGCCCTGAGCTCTGTGATCAAGCTATAGCCTTTTCTGATCCTTT
GTCATACTTCACAGATTTATCATTTAGTGCTGCATTGAAAGAGGAACAAAGATTGGATGGCATGCTATTG
GATGACACAATCTCTCCATTTGGAACAGATCCTCTGCTATCTGCCACTTCCCCTGCAGTTTCCAAAGAAA
GCAGTAGGAGAAGTAGCTTTAGCTCAGATGATGGTGATGAATTATAA

Translation (318 aa):
MTLDHQIINPTLKWSQPAVPSGGPLVQHAHTTLDSDAGLTENPLTKLLAIGKEDDNAQWHLSGSILDVYS
GEQGISPINMGLTSASCPSSLPMKREITETDTRALAKERQKKDNHNLIERRRRYNINYRIKELGTLIPKS
NDPDMRWNKGTILKASVEYIKWLQKEQQRARELEHRQKKLEQANRRLLLRIQELEIQARTHGLPTLASLG
TVDLGAHVTKQQSHPEQNSVDYCQQLTVSQGPSPELCDQAIAFSDPLSYFTDLSFSAALKEEQRLDGMLL
DDTISPFGTDPLLSATSPAVSKESSRRSSFSSDDGDEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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