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Report for CCDS37503.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37503.1 Public Mus musculus 17 Gng13 23 108 98 CCDS HistoryNCBI Gene:64337Re-query CCDS DB by CCDS ID:37503.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37503.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000115108.3 ENSMUSP00000110760.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000115108.3Link to Ensembl Protein Viewer:ENSMUSP00000110760.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000115108Re-query CCDS DB by Protein ID:ENSMUSP00000110760
Original member Current member EBI ENSMUST00000172002.7 ENSMUSP00000131648.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000172002.7Link to Ensembl Protein Viewer:ENSMUSP00000131648.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000172002Re-query CCDS DB by Protein ID:ENSMUSP00000131648
Original member Current member NCBI NM_001357782.1 NP_001344711.1 Accepted alive Link to Nucleotide Sequence:NM_001357782.1Link to Protein Sequence:NP_001344711.1Re-query CCDS DB by Nucleotide ID:NM_001357782Re-query CCDS DB by Protein ID:NP_001344711Link to BLAST:NP_001344711.1
Original member Current member NCBI NM_022422.5 NP_071867.1 Accepted alive Link to Nucleotide Sequence:NM_022422.5Link to Protein Sequence:NP_071867.1Re-query CCDS DB by Nucleotide ID:NM_022422Re-query CCDS DB by Protein ID:NP_071867Link to BLAST:NP_071867.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001344711.1 67 Q9JMF3 67 100% 0 0
NP_071867.1 67 Q9JMF3 67 100% 0 0

Chromosomal Locations for CCDS 37503.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 25718701 25718798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25718927 25719032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (204 nt):
ATGGAGGAGTGGGATGTGCCCCAGATGAAGAAGGAGGTAGAGAGCCTCAAGTACCAACTGGCCTTCAAGA
GGGAGATGTCGTCCAAGACCATCCCCGAGCTTCTCAAGTGGATTGAGGATGGAATCCCCAAGGACCCCTT
CCTGAACCCAGACCTGATGAAGAACAACCCTTGGGTAGAGAAGGCCAAGTGCACCATCCTATGA

Translation (67 aa):
MEEWDVPQMKKEVESLKYQLAFKREMSSKTIPELLKWIEDGIPKDPFLNPDLMKNNPWVEKAKCTIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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