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Report for CCDS31312.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31312.1 Public Homo sapiens 10 INSYN2A 24 110 108 CCDS HistoryNCBI Gene:642938Re-query CCDS DB by CCDS ID:31312.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31312.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000522781.6 ENSP00000429763.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000522781.6Link to Ensembl Protein Viewer:ENSP00000429763.1Re-query CCDS DB by Nucleotide ID:ENST00000522781Re-query CCDS DB by Protein ID:ENSP00000429763
Original member Current member NCBI NM_001039762.3 NP_001034851.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001039762.3Link to Protein Sequence:NP_001034851.1Re-query CCDS DB by Nucleotide ID:NM_001039762Re-query CCDS DB by Protein ID:NP_001034851Link to BLAST:NP_001034851.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034851.1 479 Q6ZSG2-1 479 100% 0 0

Chromosomal Locations for CCDS 31312.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 127137837 127138020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127153852 127153923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127175212 127176395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1440 nt):
ATGGTCAGTAAGGACACCGGCAAATGCATACTCACAACGTCGGAGAGTGAAGTGGAACCCGCCGCCTGCC
TGGCCCTGGAGATGAAATACGCCCTGGACCCCAACCGGCAGATTAAAAAACGGAACAAAGCCCTGCAGGT
GCGGTTTAAGGATATCTGCGAGGCACAGAATGAGCAGAGGGACACACAGCTGTCCTCGGGCCAGCTGGGG
GAGAAGCGGGAGGCCAAGCCCGTGTCCTGCAGAGCAGCCTACCGCAAATACATGACAGTGCCCGCACGCA
GGTCCATCCCCAACGTCACCAAGAGCACAGGCGTGCAGACCTCGCCCGACCTTAAGAAGTGTTACCAGAC
GTTCCCTCTGGACCGCAAAAAGGGGAACCTCAAAAGCCTCCCAGCTGCAGATCCCTTTAAAAGCCAAAAC
AATGGGTTTCTAACAGATGCGAAAGAGAAGAACGAGGCTGGACCCATGGAGGAGGCCCGGCCATGTGGCG
CGGGGCGGGTGCACAAGACCACAGCCTTGGTTTTCCATTCCAACCAACACATGAACACAGTGGACCAGCC
TTTGGGGGTCAACTGCACAGAGCCCTGTAAAAGCCCGGAGCCGCTCAGCTATGGAGAAGCTGCGCTCCAA
AACTCCACTCGGCCTCCATCCGAAGAGCCCGATTACCAGCTGCTCGGGAGGGCCAAGCAGGACCGGGGGA
GGCCAAACTCCGAGGAGCCCGCTCCACCTGCCCTCAGGAGGGTGTTTAAAACGGAGGTTGCCACCGTTTA
CGCACCTGCCCTCAGTGCCAGGGCCCCCGAGCCTGGTTTGTCAGACTCTGCAGCCGCCAGCCAGTGGTCA
CTCTGCCCGGCAGATGACGAGCGGAGGAGAGCCACACATCTCAACGGGCTCCAGGCGCCCTCGGAAACTG
CCCTGGCCTGCTCACCCCCGATGCAGTGCCTGTCCCCCGAATGTAGTGAGCAGCCGTCGCAGACTCACAC
CCCGCCGGGGCTGGGGAACCAGCCTAGTCCCACAGCGGTTGCTGCAGGTGAAGAATGCCAACGAATCGTG
CCTCATACGGAAGTGGTCGACCTCAAAGCACAACTTCAGATGATGGAGAACTTGATCAGTTCAAGCCAAG
AAACCATCAAAGTGCTCTTGGGGGTCATTCAGGAGTTGGAAAAAGGAGAGGCCCATCGGGAAGGGCTTTC
ATATCGGACGGGGCAAGACACAGCTAATTGTGACACATGCAGGAACAGTGCATGTATTATCTATAGTGTG
GAGCTGGATTTTAAGCAGCAAGAAGACAAACTCCAGCCGGTTCTAAGAAAACTCCACCCTATTGAGGAAA
CTCAGGTCATACCTTCGCCTTACTCTCAGGAGACTTACTCCTCAACTCCCAAGCAAAAATCCAAAACTGA
ATCTAAAAAGCACGGAAGATGGAAACTCTGGTTCCTTTAA

Translation (479 aa):
MVSKDTGKCILTTSESEVEPAACLALEMKYALDPNRQIKKRNKALQVRFKDICEAQNEQRDTQLSSGQLG
EKREAKPVSCRAAYRKYMTVPARRSIPNVTKSTGVQTSPDLKKCYQTFPLDRKKGNLKSLPAADPFKSQN
NGFLTDAKEKNEAGPMEEARPCGAGRVHKTTALVFHSNQHMNTVDQPLGVNCTEPCKSPEPLSYGEAALQ
NSTRPPSEEPDYQLLGRAKQDRGRPNSEEPAPPALRRVFKTEVATVYAPALSARAPEPGLSDSAAASQWS
LCPADDERRRATHLNGLQAPSETALACSPPMQCLSPECSEQPSQTHTPPGLGNQPSPTAVAAGEECQRIV
PHTEVVDLKAQLQMMENLISSSQETIKVLLGVIQELEKGEAHREGLSYRTGQDTANCDTCRNSACIIYSV
ELDFKQQEDKLQPVLRKLHPIEETQVIPSPYSQETYSSTPKQKSKTESKKHGRWKLWFL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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