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Report for CCDS13389.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13389.1 Public Homo sapiens 20 ZNF335 24 110 108 CCDS HistoryNCBI Gene:63925Re-query CCDS DB by CCDS ID:13389.1See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13389.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000322927.3 ENSP00000325326.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000322927.3Link to Ensembl Protein Viewer:ENSP00000325326.2Re-query CCDS DB by Nucleotide ID:ENST00000322927Re-query CCDS DB by Protein ID:ENSP00000325326
Original member Current member NCBI NM_022095.4 NP_071378.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022095.4Link to Protein Sequence:NP_071378.1Re-query CCDS DB by Nucleotide ID:NM_022095Re-query CCDS DB by Protein ID:NP_071378Link to BLAST:NP_071378.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071378.1 1342 Q9H4Z2-1 1342 100% 0 0

Chromosomal Locations for CCDS 13389.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 45948953 45949080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45949170 45949251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45949333 45949398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45949485 45949568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45949800 45949877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45949966 45950069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45950219 45950373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45950453 45950595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45952147 45952521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45952598 45952709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45953689 45953948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45957586 45957680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45957835 45957928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45959201 45959433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45960208 45960368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45960449 45960525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45960616 45960732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45960864 45960882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45962070 45962182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45963473 45963650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45963738 45963990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45965628 45965774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45967494 45967634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45967734 45968027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45968285 45968362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45969451 45969691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45971210 45971410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4029 nt):
ATGGAGGAGAACGAGGTGGAGAGCAGCAGCGACGCGGCCCCTGGGCCTGGCCGGCCCGAGGAGCCCTCTG
AGAGCGGCCTGGGTGTGGGCACCTCAGAAGCCGTGTCCGCCGACAGCAGCGACGCCGCGGCCGCCCCGGG
GCAGGCAGAGGCCGATGACTCTGGCGTGGGGCAAAGCTCGGACCGCGGCAGCCGTTCTCAGGAGGAGGTA
TCTGAGAGCAGCTCGAGCGCAGACCCCCTGCCTAATAGCTACCTCCCTGATTCATCGTCTGTGTCTCATG
GGCCAGTGGCAGGGGTGACAGGCGGTCCCCCAGCACTTGTGCACTCTAGTGCACTCCCAGACCCCAACAT
GCTGGTGTCCGACTGCACAGCTTCCTCCTCGGACCTGGGCTCGGCCATCGACAAGATCATCGAGTCCACC
ATCGGGCCCGACCTCATCCAGAACTGCATCACTGTGACCAGTGCTGAGGATGGCGGGGCCGAGACCACAC
GGTACCTGATCCTACAGGGCCCAGATGATGGAGCCCCCATGACATCACCAATGTCCAGTTCCACCTTGGC
CCACAGCCTAGCAGCCATTGAGGCCCTGGCAGATGGCCCCACATCCACATCCACATGCCTGGAGGCACAG
GGTGGGCCCAGCTCCCCGGTGCAGCTGCCCCCAGCCTCCGGTGCCGAAGAGCCGGACCTGCAGAGCCTGG
AGGCCATGATGGAGGTGGTGGTGGTGCAGCAGTTCAAATGCAAGATGTGCCAGTACCGGAGCAGCACCAA
GGCCACACTGCTGCGCCACATGCGGGAACGCCACTTCCGTCCAGTAGCAGCAGCCGCAGCAGCAGCTGGT
AAAAAAGGACGTCTACGGAAGTGGAGCACCTCCACCAAGAGCCAAGAGGAAGAGGGACCAGAGGAGGAGG
ACGATGATGACATTGTAGACGCTGGAGCCATTGATGACCTGGAGGAGGATAGCGACTATAATCCAGCTGA
GGATGAGCCCCGAGGCCGGCAGCTTCGGCTCCAGCGCCCCACCCCCAGTACCCCAAGGCCCCGAAGGAGA
CCTGGCCGGCCCCGGAAGCTGCCCCGCCTGGAGATCTCAGACCTCCCAGATGGTGTGGAAGGAGAGCCTC
TAGTGAGTTCCCAGAGTGGACAGAGCCCTCCAGAGCCACAGGATCCCGAGGCTCCCAGCTCCTCAGGCCC
AGGACACCTGGTGGCCATGGGCAAGGTGAGCAGGACCCCTGTGGAAGCTGGTGTGAGCCAGTCAGATGCA
GAGAACGCAGCCCCCTCCTGCCCGGATGAGCATGACACTCTGCCCCGGCGCCGAGGTCGACCTTCCAGGC
GCTTCCTAGGCAAGAAATACCGCAAGTACTATTACAAGTCGCCCAAACCACTTTTGAGGCCCTTCCTGTG
CCGCATCTGTGGTTCTCGCTTTCTGTCCCACGAGGACCTGCGCTTCCACGTCAACTCCCATGAGGCTGGC
GATCCCCAGCTCTTCAAGTGCCTGCAGTGCAGCTATCGTTCCCGCCGCTGGTCCTCGCTCAAGGAGCACA
TGTTCAACCACGTGGGCAGCAAGCCCTACAAGTGTGACGAGTGCAGCTACACCAGTGTCTACCGGAAGGA
CGTCATTCGGCACGCCGCTGTGCACAGCCGGGACCGGAAGAAGAGGCCAGATCCGACTCCAAAGCTGAGC
TCTTTCCCCTGCCCTGTGTGTGGCCGTGTGTACCCCATGCAGAAAAGACTCACGCAGCACATGAAGACGC
ACAGCACTGAGAAGCCCCACATGTGTGACAAGTGTGGAAAGTCCTTTAAGAAGCGCTACACCTTCAAAAT
GCACCTGCTCACGCACATCCAGGCTGTTGCCAACCGCAGGTTCAAGTGTGAGTTCTGTGAGTTTGTTTGT
GAAGACAAGAAGGCACTGCTGAACCACCAGTTGTCCCACGTCAGTGACAAGCCCTTCAAATGCAGCTTTT
GTCCCTACCGCACCTTCCGAGAGGACTTCTTGCTGTCCCATGTGGCTGTCAAGCACACAGGGGCCAAGCC
CTTCGCCTGTGAGTACTGCCACTTCAGCACACGGCACAAGAAGAACCTGCGCCTGCACGTACGGTGCCGA
CACGCAAGCAGCTTCGAGGAATGGGGGAGGCGCCACCCTGAGGAGCCCCCCTCCCGCCGTCGCCCCTTCT
TCTCTCTGCAGCAGATTGAGGAGCTGAAGCAGCAGCACAGTGCGGCCCCTGGACCACCTCCCAGTTCCCC
AGGACCTCCTGAGATACCCCCAGAGGCGACAACTTTCCAGTCATCTGAGGCTCCCTCATTGCTCTGTTCT
GACACCCTGGGCGGCGCCACCATCATCTACCAGCAAGGAGCTGAGGAGTCGACAGCGATGGCCACGCAGA
CAGCCTTGGATCTTCTGCTGAACATGAGTGCTCAGCGGGAACTGGGGGGCACAGCCCTGCAGGTGGCTGT
GGTGAAGTCGGAAGATGTGGAAGCAGGGTTAGCATCCCCTGGTGGGCAGCCCTCCCCTGAAGGTGCCACT
CCACAGGTGGTCACCCTCCACGTGGCAGAGCCAGGGGGCGGTGCAGCAGCCGAGAGCCAGCTAGGCCCTC
CTGACCTACCGCAGATCACCCTGGCACCTGGTCCATTTGGTGGGACTGGCTACAGTGTCATCACAGCACC
CCCTATGGAGGAGGGAACATCAGCTCCTGGCACACCTTACAGCGAGGAGCCCGCAGGAGAGGCAGCCCAG
GCTGTGGTTGTGAGTGACACCCTAAAAGAAGCTGGCACCCACTACATCATGGCTACTGATGGTACCCAGT
TGCACCACATTGAGCTCACCGCAGATGGCTCCATCTCCTTCCCAAGTCCAGATGCTCTGGCCTCTGGTGC
CAAATGGCCCCTGCTGCAGTGTGGGGGACTGCCCAGAGACGGCCCTGAGCCCCCATCTCCAGCCAAGACC
CACTGCGTAGGGGACTCCCAGAGCTCTGCCTCCTCACCTCCTGCAACCAGCAAAGCCCTGGGCCTGGCAG
TGCCCCCGTCACCGCCATCTGCAGCCACTGCTGCATCAAAGAAGTTTTCCTGCAAGATCTGTGCCGAGGC
CTTCCCTGGCCGAGCTGAGATGGAGAGTCACAAGCGGGCCCACGCTGGGCCTGGTGCCTTCAAGTGCCCC
GACTGCCCCTTCAGTGCCCGCCAGTGGCCCGAGGTCCGGGCGCACATGGCACAGCACTCAAGCCTACGGC
CCCACCAGTGTAGCCAGTGCAGCTTTGCCTCCAAGAACAAGAAGGACCTGCGTCGGCACATGCTGACTCA
CACAAAGGAGAAGCCTTTTGCATGCCACCTCTGCGGGCAGCGTTTCAACCGTAACGGGCACCTCAAGTTC
CACATCCAGCGGCTGCACAGTCCTGATGGGAGGAAGTCAGGAACCCCTACAGCCCGGGCCCCTACCCAGA
CCCCAACCCAGACCATCATCCTGAACAGTGATGACGAAACACTGGCCACCCTGCACACTGCACTCCAGTC
CAGTCACGGGGTCCTGGGCCCAGAGCGGCTACAGCAGGCACTGAGCCAGGAACACATCATCGTTGCCCAG
GAACAGACAGTGACCAATCAGGAGGAAGCCGCCTACATCCAAGAGATCACCACGGCAGATGGCCAGACCG
TACAGCACCTGGTGACCTCCGACAACCAGGTGCAGTATATCATCTCCCAGGATGGTGTCCAGCACCTGCT
CCCCCAGGAATATGTTGTGGTCCCTGAAGGCCATCACATCCAGGTACAGGAGGGCCAGATCACACACATC
CAGTATGAACAAGGAGCCCCGTTCCTTCAGGAGTCCCAGATCCAGTATGTGCCTGTGTCCCCAGGCCAGC
AGCTTGTCACACAGGCTCAACTTGAGGCTGCAGCACACTCAGCTGTCACAGCAGTGGCTGATGCTGCCAT
GGCCCAAGCCCAGGGCCTGTTTGGTACAGACGAGACAGTGCCCGAACACATTCAACAGCTGCAGCACCAG
GGCATCGAGTACGACGTCATCACCCTGGCCGATGACTGA

Translation (1342 aa):
MEENEVESSSDAAPGPGRPEEPSESGLGVGTSEAVSADSSDAAAAPGQAEADDSGVGQSSDRGSRSQEEV
SESSSSADPLPNSYLPDSSSVSHGPVAGVTGGPPALVHSSALPDPNMLVSDCTASSSDLGSAIDKIIEST
IGPDLIQNCITVTSAEDGGAETTRYLILQGPDDGAPMTSPMSSSTLAHSLAAIEALADGPTSTSTCLEAQ
GGPSSPVQLPPASGAEEPDLQSLEAMMEVVVVQQFKCKMCQYRSSTKATLLRHMRERHFRPVAAAAAAAG
KKGRLRKWSTSTKSQEEEGPEEEDDDDIVDAGAIDDLEEDSDYNPAEDEPRGRQLRLQRPTPSTPRPRRR
PGRPRKLPRLEISDLPDGVEGEPLVSSQSGQSPPEPQDPEAPSSSGPGHLVAMGKVSRTPVEAGVSQSDA
ENAAPSCPDEHDTLPRRRGRPSRRFLGKKYRKYYYKSPKPLLRPFLCRICGSRFLSHEDLRFHVNSHEAG
DPQLFKCLQCSYRSRRWSSLKEHMFNHVGSKPYKCDECSYTSVYRKDVIRHAAVHSRDRKKRPDPTPKLS
SFPCPVCGRVYPMQKRLTQHMKTHSTEKPHMCDKCGKSFKKRYTFKMHLLTHIQAVANRRFKCEFCEFVC
EDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRCR
HASSFEEWGRRHPEEPPSRRRPFFSLQQIEELKQQHSAAPGPPPSSPGPPEIPPEATTFQSSEAPSLLCS
DTLGGATIIYQQGAEESTAMATQTALDLLLNMSAQRELGGTALQVAVVKSEDVEAGLASPGGQPSPEGAT
PQVVTLHVAEPGGGAAAESQLGPPDLPQITLAPGPFGGTGYSVITAPPMEEGTSAPGTPYSEEPAGEAAQ
AVVVSDTLKEAGTHYIMATDGTQLHHIELTADGSISFPSPDALASGAKWPLLQCGGLPRDGPEPPSPAKT
HCVGDSQSSASSPPATSKALGLAVPPSPPSAATAASKKFSCKICAEAFPGRAEMESHKRAHAGPGAFKCP
DCPFSARQWPEVRAHMAQHSSLRPHQCSQCSFASKNKKDLRRHMLTHTKEKPFACHLCGQRFNRNGHLKF
HIQRLHSPDGRKSGTPTARAPTQTPTQTIILNSDDETLATLHTALQSSHGVLGPERLQQALSQEHIIVAQ
EQTVTNQEEAAYIQEITTADGQTVQHLVTSDNQVQYIISQDGVQHLLPQEYVVVPEGHHIQVQEGQITHI
QYEQGAPFLQESQIQYVPVSPGQQLVTQAQLEAAAHSAVTAVADAAMAQAQGLFGTDETVPEHIQQLQHQ
GIEYDVITLADD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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