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Report for CCDS77898.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77898.1 Public Homo sapiens 4 MAN2B2 24 110 108 CCDS HistoryNCBI Gene:23324Re-query CCDS DB by CCDS ID:77898.1Re-query CCDS DB by GeneID:23324See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77898.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000504248.5 ENSP00000423129.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000504248.5Link to Ensembl Protein Viewer:ENSP00000423129.1Re-query CCDS DB by Nucleotide ID:ENST00000504248Re-query CCDS DB by Protein ID:ENSP00000423129
Original member Current member NCBI NM_001292038.2 NP_001278967.1 Accepted alive Link to Nucleotide Sequence:NM_001292038.2Link to Protein Sequence:NP_001278967.1Re-query CCDS DB by Nucleotide ID:NM_001292038Re-query CCDS DB by Protein ID:NP_001278967Link to BLAST:NP_001278967.1

Chromosomal Locations for CCDS 77898.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 6575211 6575348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6576578 6576724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6578393 6578498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6586996 6587168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6589045 6589160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6593173 6593284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6594621 6594732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6597113 6597303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6598198 6598354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6600623 6600756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6605055 6605329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6609107 6609298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6609798 6610050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6610880 6610990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6611086 6611278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6614218 6614355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6617380 6617492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6619927 6620044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6621188 6621285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2877 nt):
ATGGGGCAGCTGTGCTGGCTGCCGCTGCTGGCACCGCTCCTGTTGCTGCGACCGCCAGGGGTCCAGTCCG
CCGGCCCCATCCGGGCCTTCGTGGTGCCCCACAGCCACATGGACGTGGGCTGGGTCTACACTGTGCAGGA
AAGCATGCGGGCGTACGCCGCCAATGTCTACACCTCAGTGGTGGAAGAGCTGGCCCGCGGCCAGCAGCGC
CGGTTCATCGCTGTGGAGCAGGAGTTTTTCCGGCTGTGGTGGGATGGCGTCGCCTCGGACCAGCAGAAAT
ACCAGGTCCGCCAGCTCCTGGAGGAAGGACGCCTGGAATTTGTCATCGGAGGCCAGGTCATGCATGACGA
GGCTGTGACGCACCTTGATGACCAGATCCTGCAGCTCACAGAAGGACACGGGTTTCTCTATGAAACATTT
GGGATCCGGCCACAGTTCTCCTGGCACGTTGACCCGTTTGGCGCCTCTGCCACGACGCCCACCCTATTTG
CGCTGGCGGGCTTCAATGCCCACCTCGGCTCCCGGATCGACTACGACCTGAAGGCAGCCATGCAGGAGGC
CCGGGGGCTGCAGTTCGTGTGGCGAGGGTCCCCATCCCTCTCAGAGCGGCAGGAAATCTTCACGCACATC
ATGGACCAGTACAGCTACTGCACCCCGTCCCACATCCCTTTCTCCAACAGGTCAGGATTTTACTGGAATG
GCGTGGCTGTCTTCCCCAAGCCTCCCCAAGATGGGGTGTACCCCAACATGAGTGAGCCTGTCACCCCAGC
CAACATCAACCTCTATGCCGAGCTCGGTGTCTCGGTGCAGTATGCCACGCTGGGCGACTACTTCCGTGCC
CTGCACGCTCTCAATGTCACCTGGCGTGTCCGCGACCACCACGACTTCCTGCCCTATTCCACAGAACCAT
TCCAGGCCTGGACGGGCTTCTACACGTCCCGCAGCTCACTGAAGGGGCTGGCCCGGCGAGCCAGCGCCTT
GTTGTATGCCGGGGAGTCCATGTTCACACGCTACCTGTGGCCGGCCCCCCGTGGGCATCTGGACCCCACC
TGGGCCCTGCAGCAGCTCCAGCAGCTTCGCTGGGCCGTCTCCGAGGTCCAGCACCATGATGCCATCACTG
GGACTGAGTCCCCCAAGGTGAGAGACATGTACGCAACGCACCTGGCCTCGGGGATGCTGGGCATGCGCAA
GCTGATGGCCTCCATCGTCCTAGATGAGCTCCAGCCCCAGGCACCCATGGCGGCCAGCTCCGATGCAGGA
CCTGCAGGACATTTTGCCTCGGTCTACAACCCGCTGGCCTGGACGGTCACCACCATCGTCACCCTGACTG
TTGGTTTCCCTGGAGTCCGCGTCACAGATGAGGCGGGCCACCCAGTGCCCTCGCAGATCCAGAACTCAAC
AGAGACCCCATCTGCGTATGACCTGCTTATTCTGACCACAATCCCAGGCCTCAGTTACCGGCACTACAAC
ATCAGACCCACTGCAGGGGCCCAAGAGGGCACCCAGGAGCCGGCTGCCACTGTGGCGAGCACCCTTCAAT
TTGGCCGCAGGCTGAGGAGACGCACCAGCCATGCGGGCAGGTACTTGGTGCCTGTGGCAAACGACTGCTA
CATTGTGCTGCTCGACCAGGATACCAACCTGATGCACAGCATCTGGGAGAGACAGAGTAACCGAACGGTG
CGCGTGACCCAGGAATTCCTGGAGTACCACGTCAACGGGGATGTGAAACAGGGCCCCATTTCCGATAACT
ACCTGTTCACACCGGGCAAGGCCGCGGTGCCTGCGTGGGAAGCTGTGGAAATGGAGATTGTGGCGGGACA
GCTTGTGACTGAGATCCGGCAGTACTTCTACAGGAACATGACAGCACAGAATTACACGTATGCAATCCGC
TCCCGGCTCACCCATGTGCCGCAGGGCCATGACGGGGAGCTGCTCTGCCACCGGATAGAGCAGGAGTACC
AAGCCGGCCCCCTGGAGCTGAACCGTGAGGCTGTCCTGAGGACCAGCACCAACCTAAACAGCCAGCAGGT
CATCTACTCAGACAACAACGGCTACCAGATGCAGCGGAGGCCCTACGTTTCCTATGTGAACAACAGCATC
GCCCGGAATTACTACCCCATGGTTCAGTCGGCCTTCATGGAGGATGGCAAAAGCAGGCTTGTGTTGCTGT
CGGAGCGGGCACATGGCATCTCCAGCCAAGGGAATGGGCAGGTGGAGGTCATGCTCCACCGGCGGCTGTG
GAACAACTTCGACTGGGACCTGGGCTACAACCTCACGCTGAACGACACCTCAGTCGTCCACCCAGTGCTC
TGGCTTCTGCTGGGATCCTGGTCCCTCACCACTGCCCTGCGCCAGAGGAGCGCACTGGCGCTGCAGCACA
GGCCCGTGGTGCTGTTCGGAGACCTCGCTGGGACTGCGCCGAAGCTCCCAGGACCCCAGCAGCAAGAGGC
CGTGACGCTGCCCCCGAATCTTCACCTGCAGATCCTGAGCATCCCTGGCTGGCGCTACAGCTCCAACCAC
ACGGAGCACTCTCAGAATCTCCGGAAAGGCCATCGAGGGGAAGCCCAGGCTGACCTCCGCCGTGTCCTGC
TGCGGCTCTACCACCTATATGAAGTGGGCGAGGACCCAGTCCTGTCTCAGCCAGTGACAGTGAATCTGGA
GGCTGTGCTGCAGGCGCTGGGGTCCGTGGTGGCAGTGGAGGAGCGCTCGCTCACAGGGACCTGGGATTTG
AGCATGCTGCACCGCTGGAGCTGGAGGACGGGGCCTGGCCGCCACAGAGGTGACACCACCTCTCCCTCGA
GGCCACCAGGAGGCCCCATCATCACCGTCCACCCAAAGGAAATCCGGACGTTCTTTATTCACTTTCAACA
GCAGTGA

Translation (958 aa):
MGQLCWLPLLAPLLLLRPPGVQSAGPIRAFVVPHSHMDVGWVYTVQESMRAYAANVYTSVVEELARGQQR
RFIAVEQEFFRLWWDGVASDQQKYQVRQLLEEGRLEFVIGGQVMHDEAVTHLDDQILQLTEGHGFLYETF
GIRPQFSWHVDPFGASATTPTLFALAGFNAHLGSRIDYDLKAAMQEARGLQFVWRGSPSLSERQEIFTHI
MDQYSYCTPSHIPFSNRSGFYWNGVAVFPKPPQDGVYPNMSEPVTPANINLYAELGVSVQYATLGDYFRA
LHALNVTWRVRDHHDFLPYSTEPFQAWTGFYTSRSSLKGLARRASALLYAGESMFTRYLWPAPRGHLDPT
WALQQLQQLRWAVSEVQHHDAITGTESPKVRDMYATHLASGMLGMRKLMASIVLDELQPQAPMAASSDAG
PAGHFASVYNPLAWTVTTIVTLTVGFPGVRVTDEAGHPVPSQIQNSTETPSAYDLLILTTIPGLSYRHYN
IRPTAGAQEGTQEPAATVASTLQFGRRLRRRTSHAGRYLVPVANDCYIVLLDQDTNLMHSIWERQSNRTV
RVTQEFLEYHVNGDVKQGPISDNYLFTPGKAAVPAWEAVEMEIVAGQLVTEIRQYFYRNMTAQNYTYAIR
SRLTHVPQGHDGELLCHRIEQEYQAGPLELNREAVLRTSTNLNSQQVIYSDNNGYQMQRRPYVSYVNNSI
ARNYYPMVQSAFMEDGKSRLVLLSERAHGISSQGNGQVEVMLHRRLWNNFDWDLGYNLTLNDTSVVHPVL
WLLLGSWSLTTALRQRSALALQHRPVVLFGDLAGTAPKLPGPQQQEAVTLPPNLHLQILSIPGWRYSSNH
TEHSQNLRKGHRGEAQADLRRVLLRLYHLYEVGEDPVLSQPVTVNLEAVLQALGSVVAVEERSLTGTWDL
SMLHRWSWRTGPGRHRGDTTSPSRPPGGPIITVHPKEIRTFFIHFQQQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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