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Report for CCDS48070.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48070.1 Public Homo sapiens 9 PNPLA7 24 110 108 CCDS HistoryNCBI Gene:375775Re-query CCDS DB by CCDS ID:48070.1Re-query CCDS DB by GeneID:375775See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48070.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000406427.6 ENSP00000384610.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000406427.6Link to Ensembl Protein Viewer:ENSP00000384610.1Re-query CCDS DB by Nucleotide ID:ENST00000406427Re-query CCDS DB by Protein ID:ENSP00000384610
Original member Current member NCBI NM_001098537.3 NP_001092007.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001098537.3Link to Protein Sequence:NP_001092007.2Re-query CCDS DB by Nucleotide ID:NM_001098537Re-query CCDS DB by Protein ID:NP_001092007Link to BLAST:NP_001092007.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001092007.2 1342 Q6ZV29-5 1342 100% 0 0

Chromosomal Locations for CCDS 48070.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 137460393 137460476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137460634 137460737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137461536 137461620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137461931 137462041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137462179 137462331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137462685 137462833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137463415 137463531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137464126 137464195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137464340 137464456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137467317 137467473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137478034 137478152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137479056 137479238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137480312 137480480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137480960 137481023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137484587 137484736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137493013 137493082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137495033 137495146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137497187 137497310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137498114 137498245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137500691 137500896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137501650 137501727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137505614 137505760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137505983 137506083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137515379 137515519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137519917 137520043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137521636 137521716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137522729 137522857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137540642 137540722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137542642 137542801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137543432 137543572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137543724 137543815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137546830 137546909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137547309 137547396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137547585 137547659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137550168 137550197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4029 nt):
ATGGAGGAAGAGAAAGATGACAGCCCACAGGCTGACTTCTGCCTGGGCACCGCCCTGCACTCTTGGGGAC
TGTGGTTCACGGAGGAAGGTTCACCGTCCACCATGCTGACGGGGATTGCAGTTGGAGCCCTCCTGGCCCT
GGCCTTGGTTGGTGTCCTCATCCTTTTCATGTTCAGAAGGCTTAGACAATTTCGACAAGCACAGCCCACT
CCTCAGTACCGGTTCCGGAAGAGAGACAAAGTGATGTTTTACGGCCGGAAGATCATGAGGAAGGTGACCA
CACTCCCCAACACCCTTGTGGAGAACACTGCCCTGCCCCGGCAGCGGGCCAGGAAGAGGACCAAGGTGCT
GTCTTTGGCCAAGAGGATTCTGCGTTTCAAGAAGGAATACCCGGCCCTGCAGCCCAAGGAGCCCCCGCCC
TCCCTGCTGGAGGCCGACCTCACGGAGTTTGACGTGAAGAATTCTCACCTGCCATCGGAAGTTCTGTACA
TGCTGAAAAACGTTCGGGTCCTGGGCCACTTTGAGAAGCCGCTGTTCCTGGAGCTTTGCAAACACATCGT
CTTTGTGCAGCTGCAGGAAGGGGAGCACGTCTTCCAGCCCAGGGAGCCGGACCCCAGCATCTGTGTGGTG
CAGGACGGGCGGCTGGAGGTCTGCATCCAGGACACTGACGGCACCGAGGTGGTGGTGAAAGAGGTTCTGG
CGGGAGACAGCGTCCACAGCCTGCTCAGCATCCTGGACATCATCACCGGCCATGCTGCACCTTACAAAAC
GGTCTCCGTCCGCGCGGCCATCCCGTCCACCATCCTCCGGCTTCCAGCTGCGGCTTTTCATGGAGTTTTT
GAGAAATATCCGGAAACTCTGGTGAGGGTGGTGCAGATCATCATGGTGCGGCTGCAGAGGGTGACCTTTC
TGGCTCTGCACAACTACCTCGGCCTGACCACAGAGCTCTTCAACGCTGAGAGCCAGGCCATCCCTCTCGT
GTCTGTAGCCAGTGTGGCTGCCGGGAAGGCCAAGAAGCAGGTGTTCTATGGCGAAGAAGAGCGGCTTAAA
AAGCCACCGCGGCTCCAGGAGTCCTGTGACTCAGATCACGGGGGCGGCCGCCCGGCAGCTGCTGGGCCCC
TGCTGAAGAGGAGCCACTCCGTCCCCGCGCCTTCCATTCGCAAACAGATCTTGGAGGAGCTGGAGAAGCC
CGGGGCAGGTGACCCTGACCCTTCGGCCCCACAAGGGGGCCCAGGCAGTGCCACTTCTGATCTGGGGATG
GCATGTGACCGTGCCAGGGTCTTCCTGCACTCGGACGAGCACCCCGGGAGCTCCGTGGCCAGCAAGTCCA
GGAAAAGCGTGATGGTTGCAGAGATACCCTCCACGGTCTCCCAGCACTCAGAGAGTCACACGGATGAGAC
CCTGGCCAGCAGGAAGTCGGATGCCATCTTCAGAGCTGCCAAGAAGGACCTGCTCACCCTGATGAAGCTG
GAAGACTCATCTCTGTTGGATGGCCGGGTGGCGCTTCTGCACGTTCCTGCAGGCACGGTGGTGTCAAGGC
AGGGAGACCAGGACGCCAGCATCCTGTTCGTGGTCTCGGGGCTGCTGCACGTGTACCAGCGGAAGATCGG
CAGCCAGGAGGACACCTGCTTGTTCCTCACGCGCCCCGGGGAGATGGTGGGCCAGCTGGCCGTGCTCACC
GGGGAGCCTCTCATCTTCACCGTCAAGGCCAACAGGGACTGCAGCTTCCTGTCCATCTCCAAGGCCCACT
TCTATGAAATCATGCGGAAGCAGCCGACCGTCGTCCTGGGTGTGGCGCACACTGTGGTGAAGAGGATGTC
GTCCTTCGTGCGGCAAATCGACTTTGCCCTGGACTGGGTGGAGGTGGAGGCCGGGCGAGCAATATACAGG
CAGGGGGACAAGTCCGACTGCACGTACATCATGCTCAGCGGCCGGCTGCGCTCTGTGATCCGGAAGGATG
ATGGGAAGAAGCGCCTGGCCGGGGAGTACGGCCGAGGAGACCTCGTCGGCGTGGTGGAGACACTGACCCA
CCAGGCCCGGGCGACCACGGTGCATGCCGTTCGGGACTCAGAATTGGCCAAGCTGCCGGCAGGAGCCCTC
ACGTCCATCAAGCGCAGGTACCCACAGGTGGTGACTCGGCTGATTCATCTCTTGGGTGAGAAGATCCTGG
GCAGCCTCCAGCAGGGACCTGTGACAGGCCACCAGCTTGGGCTCCCCACGGAGGGCAGCAAGTGGGACTT
GGGGAACCCGGCTGTCAACCTGTCCACGGTGGCAGTGATGCCCGTGTCAGAGGAAGTGCCCCTCACCGCC
TTCGCCCTGGAGCTGGAGCATGCCCTCAGCGCCATCGGCCCGACCCTGCTGCTGACTAGTGACAACATAA
AACGGCGCCTTGGCTCCGCTGCCCTGGACAGTGTTCACGAGTACCGGCTGTCCAGCTGGCTGGGGCAGCA
GGAGGACACCCACAGGATCGTGCTCTACCAGGCAGATGGCACGCTCACACCCTGGACCCAGCGCTGCGTG
CGCCAGGCCGACTGCATCCTCATCGTGGGCCTGGGTGACCAGGAGCCCACAGTGGGCGAGCTGGAGCGGA
TGCTGGAGAGCACAGCTGTGCGTGCCCAGAAGCAGCTGATCCTGCTGCACAGGGAGGAGGGCCCGGCGCC
AGCGCGCACCGTGGAGTGGCTCAACATGCGGAGCTGGTGCTCCGGCCACCTGCACCTCTGCTGCCCGCGC
CGCGTCTTCTCCAGGAGGAGCCTGCCCAAGCTGGTGGAGATGTACAAGCATGTCTTCCAGCGGCCCCCGG
ACCGACACTCAGACTTCTCCCGCCTGGCGAGGGTGCTGACGGGCAACGCCATTGCCCTGGTGCTTGGGGG
AGGGGGAGCAAGAGGCTGTGCCCAGGTGGGCGTTCTCAAGGCCTTGGCGGAGTGCGGCATCCCTGTGGAC
ATGGTGGGAGGCACGTCCATCGGGGCCTTCGTGGGTGCCCTGTACTCTGAGGAGCGGAACTACAGCCAGA
TGCGGATCCGGGCCAAGCAGTGGGCCGAGGGCATGACGTCCTTGATGAAGGCCGCGCTGGACCTCACCTA
CCCCATCACGTCCATGTTCTCCGGAGCCGGCTTCAACAGCAGCATCTTCAGCGTCTTCAAGGACCAGCAG
ATCGAGGACCTGTGGATTCCTTATTTCGCCATCACCACCGACATCACAGCCTCGGCCATGCGGGTCCACA
CCGACGGCTCCCTGTGGTGGTACGTGCGTGCCAGCATGTCCCTGTCCGGTTACATGCCCCCTCTCTGTGA
CCCGAAGGACGGACACCTGCTGATGGACGGGGGCTACATCAACAACCTCCCAGCGGATGTGGCCCGGTCC
ATGGGGGCAAAAGTGGTGATCGCCATTGACGTGGGCAGCCGAGATGAGACGGACCTCACCAACTATGGGG
ATGCGCTGTCTGGGTGGTGGCTGCTGTGGAAACGCTGGAACCCCTTGGCCACGAAAGTCAAGGTGTTGAA
CATGGCAGAGATTCAGACGCGCCTGGCCTACGTGTGTTGCGTGCGGCAGCTGGAGGTGGTGAAGAGCAGT
GACTACTGCGAGTACCTGCGCCCCCCCATCGACAGCTACAGCACCCTGGACTTCGGCAAGTTCAACGAGA
TCTGCGAAGTGGGCTACCAGCACGGGCGCACGGTGTTTGACATCTGGGGCCGCAGCGGCGTGCTGGAGAA
GATGCTCCGCGACCAGCAGGGGCCGAGCAAGAAGCCCGCGAGTGCGGTCCTCACCTGTCCCAACGCCTCC
TTCACGGACCTTGCCGAAATTGTGTCTCGCATTGAGCCCGCCAAGCCCGCCATGGTGGATGACGAATCTG
ACTACCAGACGGAGTACGAGGAGGAGCTGCTGGACGTCCCCAGGGATGCATACGCAGACTTCCAGAGCAC
CTCAGCCCAGCAGGGCTCAGACTTGGAGGACGAGTCCTCACTGCGGCATCGACACCCCAGTCTGGCTTTC
CCAAAACTGTCTGAGGGCTCCTCTGACCAGGACGGGTAG

Translation (1342 aa):
MEEEKDDSPQADFCLGTALHSWGLWFTEEGSPSTMLTGIAVGALLALALVGVLILFMFRRLRQFRQAQPT
PQYRFRKRDKVMFYGRKIMRKVTTLPNTLVENTALPRQRARKRTKVLSLAKRILRFKKEYPALQPKEPPP
SLLEADLTEFDVKNSHLPSEVLYMLKNVRVLGHFEKPLFLELCKHIVFVQLQEGEHVFQPREPDPSICVV
QDGRLEVCIQDTDGTEVVVKEVLAGDSVHSLLSILDIITGHAAPYKTVSVRAAIPSTILRLPAAAFHGVF
EKYPETLVRVVQIIMVRLQRVTFLALHNYLGLTTELFNAESQAIPLVSVASVAAGKAKKQVFYGEEERLK
KPPRLQESCDSDHGGGRPAAAGPLLKRSHSVPAPSIRKQILEELEKPGAGDPDPSAPQGGPGSATSDLGM
ACDRARVFLHSDEHPGSSVASKSRKSVMVAEIPSTVSQHSESHTDETLASRKSDAIFRAAKKDLLTLMKL
EDSSLLDGRVALLHVPAGTVVSRQGDQDASILFVVSGLLHVYQRKIGSQEDTCLFLTRPGEMVGQLAVLT
GEPLIFTVKANRDCSFLSISKAHFYEIMRKQPTVVLGVAHTVVKRMSSFVRQIDFALDWVEVEAGRAIYR
QGDKSDCTYIMLSGRLRSVIRKDDGKKRLAGEYGRGDLVGVVETLTHQARATTVHAVRDSELAKLPAGAL
TSIKRRYPQVVTRLIHLLGEKILGSLQQGPVTGHQLGLPTEGSKWDLGNPAVNLSTVAVMPVSEEVPLTA
FALELEHALSAIGPTLLLTSDNIKRRLGSAALDSVHEYRLSSWLGQQEDTHRIVLYQADGTLTPWTQRCV
RQADCILIVGLGDQEPTVGELERMLESTAVRAQKQLILLHREEGPAPARTVEWLNMRSWCSGHLHLCCPR
RVFSRRSLPKLVEMYKHVFQRPPDRHSDFSRLARVLTGNAIALVLGGGGARGCAQVGVLKALAECGIPVD
MVGGTSIGAFVGALYSEERNYSQMRIRAKQWAEGMTSLMKAALDLTYPITSMFSGAGFNSSIFSVFKDQQ
IEDLWIPYFAITTDITASAMRVHTDGSLWWYVRASMSLSGYMPPLCDPKDGHLLMDGGYINNLPADVARS
MGAKVVIAIDVGSRDETDLTNYGDALSGWWLLWKRWNPLATKVKVLNMAEIQTRLAYVCCVRQLEVVKSS
DYCEYLRPPIDSYSTLDFGKFNEICEVGYQHGRTVFDIWGRSGVLEKMLRDQQGPSKKPASAVLTCPNAS
FTDLAEIVSRIEPAKPAMVDDESDYQTEYEEELLDVPRDAYADFQSTSAQQGSDLEDESSLRHRHPSLAF
PKLSEGSSDQDG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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