NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS81968.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81968.1 Public Homo sapiens 16 NPIPB13 24 110 108 CCDS HistoryNCBI Gene:613037Re-query CCDS DB by CCDS ID:81968.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81968.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000520915.5 ENSP00000429734.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000520915.5Link to Ensembl Protein Viewer:ENSP00000429734.1Re-query CCDS DB by Nucleotide ID:ENST00000520915Re-query CCDS DB by Protein ID:ENSP00000429734
Original member Current member EBI ENST00000697092.1 ENSP00000513103.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000697092.1Link to Ensembl Protein Viewer:ENSP00000513103.1Re-query CCDS DB by Nucleotide ID:ENST00000697092Re-query CCDS DB by Protein ID:ENSP00000513103
Original member Current member NCBI NM_001321892.3 NP_001308821.1 Accepted alive Link to Nucleotide Sequence:NM_001321892.3Link to Protein Sequence:NP_001308821.1Re-query CCDS DB by Nucleotide ID:NM_001321892Re-query CCDS DB by Protein ID:NP_001308821Link to BLAST:NP_001308821.1
Original member Current member NCBI NM_001395859.2 NP_001382788.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001395859.2Link to Protein Sequence:NP_001382788.1Re-query CCDS DB by Nucleotide ID:NM_001395859Re-query CCDS DB by Protein ID:NP_001382788Link to BLAST:NP_001382788.1
Original member Current member NCBI NM_001395860.2 NP_001382789.1 Accepted alive Link to Nucleotide Sequence:NM_001395860.2Link to Protein Sequence:NP_001382789.1Re-query CCDS DB by Nucleotide ID:NM_001395860Re-query CCDS DB by Protein ID:NP_001382789Link to BLAST:NP_001382789.1
Original member Current member NCBI NM_001395861.2 NP_001382790.1 Accepted alive Link to Nucleotide Sequence:NM_001395861.2Link to Protein Sequence:NP_001382790.1Re-query CCDS DB by Nucleotide ID:NM_001395861Re-query CCDS DB by Protein ID:NP_001382790Link to BLAST:NP_001382790.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308821.1 1138 A6NJU9 1138 100% 0 0
NP_001382788.1 1138 A6NJU9 1138 100% 0 0
NP_001382789.1 1138 A6NJU9 1138 100% 0 0
NP_001382790.1 1138 A6NJU9 1138 100% 0 0

Chromosomal Locations for CCDS 81968.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 30223029 30225803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30227164 30227199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30227309 30227369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30231440 30231635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30231748 30231847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30235451 30235579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30245454 30245573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3417 nt):
ATGGTGAAGCTCTCTATTGTCCTGACCCCACAGTTCCTGTCCCATGACCAGGGCCAGCTCACCAAGGAGC
TGCAGCAGCATGTAAAGTCAGTGACATGCCCATGCGAGTACCTGAGGAAGGTTATCAATACTCTGGCTGA
CCATCATCATCGTGGGACTGACTTTGGTGGAAGTCCTTGGTTACATGTCATTATTGCGTTTCCGACAAGT
TATAAAGTTGTCATTACCCTCTGGATAGTTTACCTTTGGGTGTCTCTCCTGAAGACTATCTTCTGGTCTC
GAAATGGACATGATGGATCCACGGATGTACAGCAGAGAGCCTGGAGGTCCAACCGCCGTAGACAGGAAGG
GCTGAGGTCCATTTGTATGCACACAAAGAAAAGAGTTTCTTCCTTTCGAGGAAATAAAATTGGCCTGAAA
GACGTCATTACTCTACGGAGACATGTGGAAACAAAAGTTAGAGCTAAAATCCGTAAGAGGAAGGTGACAA
CGAAAATCAACCATCATGACAAAATCAATGGAAAGAGGAAGACCGCCAGAAAACAGAAAATGTTTCAACG
TGCGCAAGAGTTGCGGCGGCGGGCAGAGGACTACCACAAATGCAAAATCCCCCCTTCTGCAAGAAAGGCT
CTTTGCAACTGGGTCAGAATGGCGGCAGCGGAGCATCGTCATTCTTCAGGATTGCCCTACTGGCCCTACC
TCACAGCTGAAACTTTAAAAAACAGGATGGGCCACCAGCCACCTCCTCCAACTCAACAACATTCTATAAC
TGATAACTCCCTGAGCCTCAAGACACCTCCCGAGTGTGTGCTCACTCCCCTTCCACCCTCAGCGGATGAT
AATCTCAAGACACCTCCCGAGTGTGTGCTCACTCCCCTTCCACCCTCAGCGGATGATAATCTCAAGACAC
CTCCTGAGTGTCTGCTCACTCCCCTTCCACCCTCAGCGGATGATAATCTCAAGACACCTCCTGAGTGTCT
GCTCACTCCCCTTCCACCCTCAGCGGATGATAATCTCAAGACACCTCCCGAGTGTCTGCTCACTCCCCTT
CCACCCTCAGCTCCACCCTCAGCTCCACCCTCAGCGGATGATAATCTCAAGACACGTGCCGAGTGTCTGC
TCCATCCCCTTCCACCCTCAGCGGATGATAATCTCAAGACACCTTCCGAGCGTCAGCTCACTCCCCTTCC
ACCCTCAGCTCCACCCTCAGCAGATGATAATATCAAGACACCTGCCGAGCGTCTGCGGGGGCCGCTTCCA
CCCTCAGCGGATGATAATCTCAAGACACCTTCCGAGCGTCAGCTCACTCCCCTTCCACCCTCAGCTCCAC
CCTCAGCAGATGATAATATCAAGACACCTGCCGAGCGTCTGCGGGGGCCGCTTCCACCCTCAGCGGATGA
TAATCTCAAGACACCTTCCGAGCGTCAGCTCACTCCCCTTCCACCCTCAGCTCCACCCTCAGCAGATGAT
AATATCAAGACACCTGCCGAGCGTCTGCGGGGGCCGCTTCCACCCTCAGCGGATGATAATCTCAAGACAC
CTTCCGAGCGTCAGCTCACTCCCCTTCCACCCTCAGCTCCACCCTCAGCAGATGATAATATCAAGACACC
TGCCGAGCGTCTGCGGGGGCCGCTTCCACCCTCAGCGGATGATAATCTCAAGACACCTTCCGAGCGTCAG
CTCACTCCCCTTCCACCCTCAGCTCCACCCTCAGCAGATGATAATATCAAGACACCTGCCTTCCACCCTC
AGCGGATGATAATCTCAAGACACCTTCCGAGCGTCAGCTCACTCCCCTTCCACCCTCAGCTCCACTCTCA
GCAGATGATAATATCAAGATACCTGCTGAGCGTCTGCGGATTCCGCTTCCACCATCAGCCGATGATAATC
TCAAGACACCTTCCGAGCGTCAGCTCACTCCCCTTCCACCCTCAGCTCCACCCTCAGCAGATGATAATAT
CAAGACACCTGCCGAGCGTCTGCGGGGGCCGCTTCCACCCTCAGCGGATGATAATCTCAAGACACCTTCC
GAGCGTCAGCTCACTCCCCTTCCACCCTCAGCTCCACCCTCAGCAGATGATAATATCAAGACACCTGCCG
AGCGTCTGCGGGGGCCGCTTCCACCCTCAGCGGATGATAATCTCAAGACACCTTCCGAGCGTCAGCTCAC
TCCCCTTCCACCCTCAGCTCCACCCTCAGCAGATGATAATATCAAGACACCTGCCGAGCGTCTGCGGGGA
GCGTCTGCGGGGGCCGCTTCCACCCTCAGCGGATGATAATCTCAAGACACCTTCCGAGCGTCAGCTCACT
CCCCTTCCACCCTCAGCTCCACCCTCAGCAGATGATAATATCAAGACACCTGCCGAGCGTCTGCGGAGGC
CGCTTCCACCCTCAGCGGATGATAATCTCAAGACACCTTCCGAGCGTCAGCTCACTCCCCTTCCACCCTC
AGCTCCACCCTCAGCAGATGATAATATCAAGACACCTGCCGAGCGTCTGCGGGGGCCGCTTCCACCCTCA
GCGGATGATAATCTCAAGACACCTTCCGAGCGTCAGCTCACTCCCCTTCCACCCTCAGCTCCACCCTCAG
CAGATGATAATATCAAGACACCTGCCGAGCGTCTGCGGGGGCCGCTTCCACCCTCAGCGGATGATAATCT
CAAGACACCTTCCGAGCGTCAGCTCACTCCCCTTCCACCCTCAGCTCCACCCTCAGCAGATGATAATATC
AAGACACCTGCCGAGCGTCTGCGGGGGCCGCTTCCACCCTCAGCGGATGATAATCTCAAGACACCTTCCG
AGCGTCAGCTCACTCCCCTTCCACCCTCAGCTCCACCCTCAGCAGATGATAATATCAAGACACCTGCCGA
GCGTCTGCGGGGGCCGCTTCCACCCTCAGCGGATGATAATCTCAAGACACCTTCTGAGCGTCAGCTCACT
CCCCTTCCACCCTCAGCTCCACCCTCAGCAGATGATAATATCAAGACACCTGCCGAGCGTCTGCGGGGGC
CGCTTCCACCCTCAGCCGATGATAATCTCAAGACACCTCCCTTAGCTACTCAGGAGGCTGAGGCAGAAAA
ACCACGCAAACCCAAGAGGCAGAGGGCGGCTGAGATGGAACCACCTCCCGAACCCAAGAGGCGGAGGGTC
GGTGACGTGGAACCGTCACGCAAACCCAAGAGGCGGAGGGCCGCTGACGTGGAACCATCATCACCCAAAC
CCAAGAGGCGGAGGGTCGGTGATGTGGAACCGTCACGCAAACCCAAGAGGCGGAGGGCCGCTGACGTGGA
ACCATCATCACCCGAACCCAAGAGGCGGAGGGTCGGTGACGTGGAACCGTCACGCAAACCCAAGAGGCGG
AGGGCCGCTGACGTGGAACCATCATCACCCGAACCCAAGAGGCGGAGGTTGAGCTGA

Translation (1138 aa):
MVKLSIVLTPQFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHHHRGTDFGGSPWLHVIIAFPTS
YKVVITLWIVYLWVSLLKTIFWSRNGHDGSTDVQQRAWRSNRRRQEGLRSICMHTKKRVSSFRGNKIGLK
DVITLRRHVETKVRAKIRKRKVTTKINHHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCKIPPSARKA
LCNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMGHQPPPPTQQHSITDNSLSLKTPPECVLTPLPPSADD
NLKTPPECVLTPLPPSADDNLKTPPECLLTPLPPSADDNLKTPPECLLTPLPPSADDNLKTPPECLLTPL
PPSAPPSAPPSADDNLKTRAECLLHPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLP
PSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADD
NIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQ
LTPLPPSAPPSADDNIKTPAFHPQRMIISRHLPSVSSLPFHPQLHSQQMIISRYLLSVCGFRFHHQPMII
SRHLPSVSSLPFHPQLHPQQMIISRHLPSVCGGRFHPQRMIISRHLPSVSSLPFHPQLHPQQMIISRHLP
SVCGGRFHPQRMIISRHLPSVSSLPFHPQLHPQQMIISRHLPSVCGERLRGPLPPSADDNLKTPSERQLT
PLPPSAPPSADDNIKTPAERLRRPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPS
ADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNI
KTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLT
PLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPPLATQEAEAEKPRKPKRQRAAEMEPPPEPKRRRV
GDVEPSRKPKRRRAADVEPSSPKPKRRRVGDVEPSRKPKRRRAADVEPSSPEPKRRRVGDVEPSRKPKRR
RAADVEPSSPEPKRRRLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH