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Report for CCDS41916.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41916.1 Public Homo sapiens 14 OR4E2 24 110 108 CCDS HistoryNCBI Gene:26686Re-query CCDS DB by CCDS ID:41916.1Re-query CCDS DB by GeneID:26686See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41916.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641524.1 ENSP00000493386.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641524.1Link to Ensembl Protein Viewer:ENSP00000493386.1Re-query CCDS DB by Nucleotide ID:ENST00000641524Re-query CCDS DB by Protein ID:ENSP00000493386
Original member Current member NCBI NM_001001912.3 NP_001001912.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001001912.3Link to Protein Sequence:NP_001001912.2Re-query CCDS DB by Nucleotide ID:NM_001001912Re-query CCDS DB by Protein ID:NP_001001912Link to BLAST:NP_001001912.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001912.2 313 Q8NGC2 313 99.361% 0 2

Chromosomal Locations for CCDS 41916.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 21665083 21666024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (942 nt):
ATGGACAGTCTAAACCAAACAAGAGTGACTGAATTTGTCTTCTTGGGACTCACTGATAACCGGGTGCTGG
AAATGCTGTTTTTCATGGCATTCTCAGCCATTTATATGCTAACGCTTTCGGGGAACATTCTCATCATCAT
TGCCACAGTCTTTACTCCAAGTCTCCATACCCCCATGTATTTCTTCCTGAGCAATCTGTCCTTTATTGAC
ATCTGCCACTCATCTGTCACTGTGCCTAAGATGTTGGAGGGTTTGCTTTTAGAAAGAAAGACCATTTCCT
TTGACAACTGCATCACACAGCTCTTCTTCCTACATCTCTTTGCCTGTGCCGAGATCTTTCTGCTGATCAT
TATGGCGTATGATCGTTACGTGGCTATCTGCACTCCACTCCACTACCCCAATGTGATGAACATGAGAGTC
TGTATACAGCTTGTCTTTGCTCTCTGGTTGGGGGGTACTGTTCACTCACTAGGGCAGACCTTCTTGACTA
TTCGTCTACCTTACTGTGGCCCCAACATTATTGACAGCTACTTCTGTGATGTGCCTCTTGTTATCAAGCT
GGCCTGCACAGATACATACCTCACAGGAATACTGATTGTGACCAATAGTGGAACCATCTCCCTCTCCTGT
TTCTTGGCCGTGGTCACCTCCTATATGGTCATCCTGGTTTCTCTTCGAAAACACTCAGCTGAAGGGCGCC
GGAAAGCCCTGTCTACCTGCTCGGCCCACTTCATGGTGGTTGCCCTCTTCTTTGGGCCATGTATCTTCAT
CTATACTCGGCCAGACACCAGCTTCTCCATTGACAAGGTGGTGTCTGTCTTCTACACAGTGGTCACCCCT
TTGCTGAATCCCTTCATTTACACCTTGAGGAATGAGGAGGTAAAAAGTGCCATGAAGCAGCTCAGGCAGA
GACAAGTTTTTTTCACGAAATCATATACATAA

Translation (313 aa):
MDSLNQTRVTEFVFLGLTDNRVLEMLFFMAFSAIYMLTLSGNILIIIATVFTPSLHTPMYFFLSNLSFID
ICHSSVTVPKMLEGLLLERKTISFDNCITQLFFLHLFACAEIFLLIIMAYDRYVAICTPLHYPNVMNMRV
CIQLVFALWLGGTVHSLGQTFLTIRLPYCGPNIIDSYFCDVPLVIKLACTDTYLTGILIVTNSGTISLSC
FLAVVTSYMVILVSLRKHSAEGRRKALSTCSAHFMVVALFFGPCIFIYTRPDTSFSIDKVVSVFYTVVTP
LLNPFIYTLRNEEVKSAMKQLRQRQVFFTKSYT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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