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Report for CCDS79153.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79153.1 Public Mus musculus 12 Serpina3a 23 108 98 CCDS HistoryNCBI Gene:74069Re-query CCDS DB by CCDS ID:79153.1Re-query CCDS DB by GeneID:74069See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79153.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000109965.7 ENSMUSP00000105591.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109965.7Link to Ensembl Protein Viewer:ENSMUSP00000105591.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000109965Re-query CCDS DB by Protein ID:ENSMUSP00000105591
Original member Current member NCBI NM_028740.2 NP_083016.1 Accepted alive Link to Nucleotide Sequence:NM_028740.2Link to Protein Sequence:NP_083016.1Re-query CCDS DB by Nucleotide ID:NM_028740Re-query CCDS DB by Protein ID:NP_083016Link to BLAST:NP_083016.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083016.1 232 Q6P4P1-2 232 100% 0 0

Chromosomal Locations for CCDS 79153.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 104112851 104112923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 104118421 104118694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 104119635 104119785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 104121318 104121518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (699 nt):
ATGAGGACAGTCTGGCTATTTCAGATGTTTCCTTTTTTGCTGGGTCCCAATATCAGACAGGAGCTACTTG
AAGGCTTTTGGAACGTGACTTTTGACCCTGAAGACACGTTCCTGGGAAATTTCACATTGGATAGGAAGAG
GACCGTGAATGTGCCCATGATGAAAACCGAGGAGCTAACCACAAACTACTTCCGGGACGAGGAGATGCAA
AGTACTGTGATGGAGCTGAATTACATAGGCAATGCCAGCTTCCTGTTTATCCTCCCTGACCAGGGCAGGA
TACAGCACGTGGAAGATAGCTTGCAACCCCAGTCTCTGAGGAAATGGAGGAAATCTTTGAGGCCCAGGAT
GCTAGATGAACTCTCCCTGCCCAAGTTCTCCTTATCACAAGACTACAACCTAAATGACATCCTTCCAGAG
CTGGGTATCAAGGAAGTCTTCTCCACACAGGCTGACCTGTCTGGGATCACTGGAGCCAAAAATATAAGAG
TCTCTCAGATGATCCACCAGGCTGCGCTGGATGTTACCGAGACACACACAGAAGCAGATGTCATCACAAT
AGCCCGATATAACTTCCAATCTGCAAAAATTAAGGCTAAAATTGTTAAGGTGGACAGGGAATTCTTGTAC
CTTATTTTAGACCCAATGTTTAAGAGTATTAGCGTTATGGGTAAGGTTATCAACCCTTTAACAAACTAG

Translation (232 aa):
MRTVWLFQMFPFLLGPNIRQELLEGFWNVTFDPEDTFLGNFTLDRKRTVNVPMMKTEELTTNYFRDEEMQ
STVMELNYIGNASFLFILPDQGRIQHVEDSLQPQSLRKWRKSLRPRMLDELSLPKFSLSQDYNLNDILPE
LGIKEVFSTQADLSGITGAKNIRVSQMIHQAALDVTETHTEADVITIARYNFQSAKIKAKIVKVDREFLY
LILDPMFKSISVMGKVINPLTN


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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