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Report for CCDS33849.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33849.1 Public Homo sapiens 3 EEFSEC 24 110 108 CCDS HistoryNCBI Gene:60678Re-query CCDS DB by CCDS ID:33849.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33849.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000254730.11 ENSP00000254730.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000254730.11Link to Ensembl Protein Viewer:ENSP00000254730.5Re-query CCDS DB by Nucleotide ID:ENST00000254730Re-query CCDS DB by Protein ID:ENSP00000254730
Original member Current member NCBI NM_021937.5 NP_068756.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021937.5Link to Protein Sequence:NP_068756.2Re-query CCDS DB by Nucleotide ID:NM_021937Re-query CCDS DB by Protein ID:NP_068756Link to BLAST:NP_068756.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_068756.2 596 P57772-1 596 100% 0 0

Chromosomal Locations for CCDS 33849.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 128153508 128153823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128246836 128247043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128262128 128262224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128264617 128264781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128341233 128341889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128358217 128358373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128408069 128408259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1791 nt):
ATGGCAGGGCGGCGGGTGAACGTGAACGTGGGCGTGCTGGGCCACATCGACAGCGGCAAGACGGCGCTGG
CGCGGGCGCTAAGCACCACAGCCTCCACCGCCGCCTTTGACAAGCAGCCGCAGAGCCGCGAGCGCGGCAT
CACGCTCGATCTGGGCTTCTCGTGCTTCTCGGTGCCGCTGCCCGCGCGCCTGCGGTCGTCTTTGCCCGAG
TTCCAGGCAGCGCCCGAGGCCGAGCCCGAGCCCGGCGAGCCACTGCTTCAGGTCACGCTGGTCGACTGCC
CCGGGCACGCCTCCCTCATCCGGACCATCATCGGCGGGGCCCAGATCATTGATCTGATGATGCTGGTCAT
CGATGTGACCAAGGGGATGCAGACCCAGTCAGCGGAATGCCTTGTGATCGGCCAGATTGCCTGCCAGAAG
CTGGTCGTGGTGCTGAACAAAATAGACCTCTTACCTGAAGGAAAGAGACAGGCAGCAATTGATAAAATGA
CCAAGAAAATGCAGAAGACCCTAGAGAACACCAAGTTCCGAGGTGCACCGATTATACCCGTGGCGGCCAA
GCCGGGGGGACCAGAGGCCCCCGAAACTGAAGCTCCACAGGGCATTCCAGAGCTCATTGAGCTCCTGACG
TCCCAGATTTCCATCCCAACGAGAGATCCCTCGGGACCGTTCCTCATGTCTGTGGACCACTGTTTCTCCA
TCAAAGGCCAAGGCACTGTGATGACAGGGACCATCCTTTCAGGCTCCATCAGCCTCGGTGACAGTGTGGA
GATCCCTGCCCTCAAGGTGGTGAAGAAGGTGAAGTCCATGCAGATGTTCCACATGCCCATCACTTCAGCC
ATGCAAGGAGACCGGCTGGGCATCTGCGTCACCCAGTTTGACCCTAAGCTGCTGGAGCGCGGGTTGGTGT
GTGCCCCCGAGTCCCTGCACACTGTCCATGCGGCCCTCATCTCTGTGGAAAAGATACCGTATTTCCGGGG
GCCCCTGCAAACCAAGGCCAAGTTCCACATTACAGTGGGCCATGAAACAGTCATGGGCCGGTTGATGTTC
TTCAGTCCTGCTCCAGATAACTTTGACCAGGAGCCTATACTGGACTCTTTCAACTTCTCTCAAGAATACC
TTTTCCAGGAGCAGTACCTGTCCAAGGATTTGACACCAGCAGTGACAGACAATGATGAGGCCGACAAGAA
GGCCGGCCAGGCCACAGAGGGCCATTGTCCTCGGCAGCAGTGGGCCCTGGTGGAGTTTGAGAAGCCCGTC
ACCTGCCCTCGGCTGTGCCTGGTGATTGGCTCCAGGCTAGATGCGGACATTCACACCAACACGTGCCGGC
TAGCCTTCCATGGCATCCTGCTCCACGGGCTAGAGGACAGGAACTACGCCGACAGCTTCCTGCCCAGGCT
GAAGGTGTACAAGCTGAAGCACAAGCATGGCCTTGTGGAGCGGGCGATGGATGACTACAGTGTGATCGGC
CGCTCCCTGTTCAAAAAGGAAACCAACATCCAGCTCTTCGTGGGGCTCAAGGTGCACTTGTCCACTGGGG
AACTGGGCATCATCGACAGTGCCTTCGGCCAGAGCGGCAAGTTCAAGATCCACATCCCAGGTGGCCTCAG
CCCCGAGTCCAAGAAGATCCTGACACCCGCCCTCAAGAAGCGGGCCCGGGCTGGCCGTGGGGAGGCCACC
AGGCAGGAGGAGAGCGCCGAGCGGAGCGAGCCCTCACAGCATGTGGTGCTCAGCCTGACTTTCAAGCGTT
ATGTCTTCGACACCCACAAGCGCATGGTTCAGTCTCCCTGA

Translation (596 aa):
MAGRRVNVNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITLDLGFSCFSVPLPARLRSSLPE
FQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQK
LVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVAAKPGGPEAPETEAPQGIPELIELLT
SQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSA
MQGDRLGICVTQFDPKLLERGLVCAPESLHTVHAALISVEKIPYFRGPLQTKAKFHITVGHETVMGRLMF
FSPAPDNFDQEPILDSFNFSQEYLFQEQYLSKDLTPAVTDNDEADKKAGQATEGHCPRQQWALVEFEKPV
TCPRLCLVIGSRLDADIHTNTCRLAFHGILLHGLEDRNYADSFLPRLKVYKLKHKHGLVERAMDDYSVIG
RSLFKKETNIQLFVGLKVHLSTGELGIIDSAFGQSGKFKIHIPGGLSPESKKILTPALKKRARAGRGEAT
RQEESAERSEPSQHVVLSLTFKRYVFDTHKRMVQSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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