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Report for CCDS21518.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21518.1 Public Mus musculus 7 Anapc15 23 108 98 CCDS HistoryNCBI Gene:75430Re-query CCDS DB by CCDS ID:21518.1Re-query CCDS DB by GeneID:75430See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21518.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000106978.7 ENSMUSP00000102591.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106978.7Link to Ensembl Protein Viewer:ENSMUSP00000102591.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000106978Re-query CCDS DB by Protein ID:ENSMUSP00000102591
Original member Current member EBI ENSMUST00000144207.8 ENSMUSP00000114771.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000144207.8Link to Ensembl Protein Viewer:ENSMUSP00000114771.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000144207Re-query CCDS DB by Protein ID:ENSMUSP00000114771
Original member Current member EBI ENSMUST00000178851.1 ENSMUSP00000136164.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000178851.1Link to Ensembl Protein Viewer:ENSMUSP00000136164.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000178851Re-query CCDS DB by Protein ID:ENSMUSP00000136164
Original member Current member NCBI NM_001291352.1 NP_001278281.1 Accepted alive Link to Nucleotide Sequence:NM_001291352.1Link to Protein Sequence:NP_001278281.1Re-query CCDS DB by Nucleotide ID:NM_001291352Re-query CCDS DB by Protein ID:NP_001278281Link to BLAST:NP_001278281.1
Original member Current member NCBI NM_001291353.1 NP_001278282.1 Accepted alive Link to Nucleotide Sequence:NM_001291353.1Link to Protein Sequence:NP_001278282.1Re-query CCDS DB by Nucleotide ID:NM_001291353Re-query CCDS DB by Protein ID:NP_001278282Link to BLAST:NP_001278282.1
Original member Current member NCBI NM_027532.4 NP_081808.2 Accepted alive Link to Nucleotide Sequence:NM_027532.4Link to Protein Sequence:NP_081808.2Re-query CCDS DB by Nucleotide ID:NM_027532Re-query CCDS DB by Protein ID:NP_081808Link to BLAST:NP_081808.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001278281.1 132 P60007-1 132 100% 0 0
NP_001278282.1 132 P60007-1 132 100% 0 0
NP_081808.2 132 P60007-1 132 100% 0 0

Chromosomal Locations for CCDS 21518.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 101897795 101897817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101897942 101898071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101898554 101898613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101898900 101899037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101899194 101899241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (399 nt):
ATGGAGCCAGGACTCAAACTCAGCTTAGGAGCCATGTCCACCTTGTTCCCGTCACTCTTCCCTCGTGTGA
CTGAGACACTGTGGTTTAATCTGGACCGACCCTGTGTGGAGGAGACAGAGCTGCAGCAGCAGGAGCAGCA
GCATCAGGCCTGGCTCCAAAGCATCGCAGAGAAAGACAACAACCTGGTACCAATTGGCAAGCCGGCCTCA
GAGCACTACGATGATGAGGAAGAAGAGGATGATGAAGATGATGAGGACAGTGAAGAGGATTCCGAAGATG
ATGAGGACATGCAAGACATGGATGAGATGAATGACTATAATGAGTCACCTGATGATGGAGAGGTCAATGA
GGTGGACATGGAAGGCAACGAACAGGATCAGGACCAGTGGATGATCTAG

Translation (132 aa):
MEPGLKLSLGAMSTLFPSLFPRVTETLWFNLDRPCVEETELQQQEQQHQAWLQSIAEKDNNLVPIGKPAS
EHYDDEEEEDDEDDEDSEEDSEDDEDMQDMDEMNDYNESPDDGEVNEVDMEGNEQDQDQWMI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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