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Report for CCDS6673.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6673.1 Public Homo sapiens 9 NAA35 24 110 108 CCDS HistoryNCBI Gene:60560Re-query CCDS DB by CCDS ID:6673.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 6673.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361671.10 ENSP00000354972.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361671.10Link to Ensembl Protein Viewer:ENSP00000354972.5Re-query CCDS DB by Nucleotide ID:ENST00000361671Re-query CCDS DB by Protein ID:ENSP00000354972
Original member Current member NCBI NM_001321881.2 NP_001308810.1 Accepted alive Link to Nucleotide Sequence:NM_001321881.2Link to Protein Sequence:NP_001308810.1Re-query CCDS DB by Nucleotide ID:NM_001321881Re-query CCDS DB by Protein ID:NP_001308810Link to BLAST:NP_001308810.1
Original member Current member NCBI NM_001321882.2 NP_001308811.1 Accepted alive Link to Nucleotide Sequence:NM_001321882.2Link to Protein Sequence:NP_001308811.1Re-query CCDS DB by Nucleotide ID:NM_001321882Re-query CCDS DB by Protein ID:NP_001308811Link to BLAST:NP_001308811.1
Original member Current member NCBI NM_024635.4 NP_078911.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024635.4Link to Protein Sequence:NP_078911.3Re-query CCDS DB by Nucleotide ID:NM_024635Re-query CCDS DB by Protein ID:NP_078911Link to BLAST:NP_078911.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308810.1 725 Q5VZE5-1 725 100% 0 0
NP_001308811.1 725 Q5VZE5-1 725 100% 0 0
NP_078911.3 725 Q5VZE5-1 725 100% 0 0

Chromosomal Locations for CCDS 6673.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 85942160 85942283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85956360 85956393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85958472 85958586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85959793 85959867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85962013 85962180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85974967 85975033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85975114 85975157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85976685 85976735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85977363 85977446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85978267 85978381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85996399 85996577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86003585 86003644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86007358 86007464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86009865 86009931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86013046 86013144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86013719 86013897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86016539 86016675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86017498 86017565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86018255 86018395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86018699 86018821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86020889 86020969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86021901 86021960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2178 nt):
ATGGTTATGAAAGCTTCTGTAGATGATGACGATTCAGGATGGGAGCTCAGTATGCCAGAAAAAATGGAGA
AAAGCAATACAAACTGGGTGGACATTACCCAAGATTTTGAAGAAGCTTGTCGAGAATTAAAGTTGGGAGA
ACTACTTCATGATAAGCTATTTGGTCTTTTTGAAGCCATGTCTGCTATTGAAATGATGGATCCCAAGATG
GATGCTGGCATGATTGGAAACCAAGTTAATCGAAAAGTTCTCAATTTTGAACAAGCTATCAAGGATGGCA
CTATTAAAATTAAAGATCTCACCTTGCCTGAACTGATAGGGATTATGGATACATGTTTTTGCTGTTTGAT
AACGTGGTTAGAAGGCCATTCACTGGCACAGACAGTATTTACGTGCCTTTACATTCATAATCCAGACTTT
ATAGAAGATCCTGCTATGAAGGCTTTTGCTCTGGGAATCTTGAAAATCTGTGACATTGCAAGGGAAAAAG
TAAATAAAGCTGCTGTTTTTGAAGAGGAAGATTTTCAGTCAATGACTTATGGATTTAAAATGGCTAACAG
TGTGACAGATCTTCGAGTTACAGGCATGCTAAAAGATGTGGAGGATGACATGCAAAGAAGAGTAAAGAGT
ACTCGAAGTCGACAAGGAGAAGAAAGAGATCCAGAAGTTGAACTAGAACACCAACAATGTTTAGCAGTAT
TCAGCAGAGTGAAATTTACTCGTGTGTTACTGACAGTGCTTATAGCCTTTACTAAGAAAGAGACCAGTGC
TGTTGCAGAAGCTCAAAAATTGATGGTTCAAGCAGCAGATCTTCTTTCTGCCATTCATAATTCATTGCAT
CATGGCATCCAGGCCCAGAATGATACTACAAAAGGAGATCATCCAATTATGATGGGTTTTGAACCCCTTG
TGAACCAGAGGCTACTTCCACCTACCTTCCCTCGATATGCAAAAATAATTAAAAGGGAAGAAATGGTGAA
CTATTTTGCAAGATTAATAGATAGAATAAAAACTGTCTGTGAGGTTGTGAATTTAACAAATTTACATTGT
ATCCTGGATTTTTTCTGTGAATTTAGTGAACAGTCACCATGTGTTCTTTCAAGATCTCTGTTACAAACCA
CTTTCCTGGTGGATAACAAAAAGGTCTTTGGAACTCATCTCATGCAAGACATGGTGAAAGATGCACTTCG
GTCTTTTGTCAGTCCTCCGGTGCTTTCCCCCAAGTGCTACCTATATAATAATCACCAGGCTAAGGACTGT
ATCGACTCCTTTGTTACTCACTGTGTTCGGCCATTCTGTAGTCTTATTCAGATCCATGGACATAACAGGG
CTCGACAGAGAGATAAGCTTGGTCATATTCTTGAGGAATTTGCCACCTTGCAGGATGAGGCAGAGAAGGT
TGATGCAGCGCTTCACACCATGCTGTTGAAACAGGAACCCCAAAGGCAACATTTGGCCTGTTTAGGTACC
TGGGTCCTTTACCATAACCTTCGCATTATGATACAGTACCTTCTAAGTGGCTTTGAATTGGAACTCTACA
GTATGCACGAGTACTATTACATATATTGGTATCTCTCTGAATTCCTTTACGCATGGTTGATGTCAACATT
GAGTCGTGCCGATGGCTCTCAAATGGCAGAGGAAAGGATAATGGAAGAGCAGCAGAAAGGCCGTAGTAGT
AAAAAAACAAAGAAAAAAAAGAAAGTTCGCCCATTGAGCCGAGAGATCACAATGAGCCAAGCATATCAGA
ACATGTGTGCTGGAATGTTTAAAACCATGGTAGCATTTGACATGGACGGCAAAGTACGTAAACCGAAGTT
TGAGCTTGATAGTGAACAAGTTCGGTATGAACACAGGTTTGCTCCATTCAACAGTGTGATGACCCCGCCG
CCAGTGCACTACTTACAGTTCAAGGAAATGTCTGACCTCAATAAATATAGCCCTCCTCCTCAGTCTCCTG
AACTGTATGTGGCAGCTAGTAAGCACTTTCAACAGGCAAAAATGATATTGGAAAATATTCCTAACCCGGA
CCATGAGGTTAATAGAATTTTAAAGGTTGCCAAACCCAACTTTGTGGTTATGAAGTTATTGGCAGGAGGA
CACAAAAAGGAATCTAAAGTTCCTCCTGAATTTGATTTCTCTGCTCATAAATATTTTCCTGTTGTGAAAC
TTGTTTGA

Translation (725 aa):
MVMKASVDDDDSGWELSMPEKMEKSNTNWVDITQDFEEACRELKLGELLHDKLFGLFEAMSAIEMMDPKM
DAGMIGNQVNRKVLNFEQAIKDGTIKIKDLTLPELIGIMDTCFCCLITWLEGHSLAQTVFTCLYIHNPDF
IEDPAMKAFALGILKICDIAREKVNKAAVFEEEDFQSMTYGFKMANSVTDLRVTGMLKDVEDDMQRRVKS
TRSRQGEERDPEVELEHQQCLAVFSRVKFTRVLLTVLIAFTKKETSAVAEAQKLMVQAADLLSAIHNSLH
HGIQAQNDTTKGDHPIMMGFEPLVNQRLLPPTFPRYAKIIKREEMVNYFARLIDRIKTVCEVVNLTNLHC
ILDFFCEFSEQSPCVLSRSLLQTTFLVDNKKVFGTHLMQDMVKDALRSFVSPPVLSPKCYLYNNHQAKDC
IDSFVTHCVRPFCSLIQIHGHNRARQRDKLGHILEEFATLQDEAEKVDAALHTMLLKQEPQRQHLACLGT
WVLYHNLRIMIQYLLSGFELELYSMHEYYYIYWYLSEFLYAWLMSTLSRADGSQMAEERIMEEQQKGRSS
KKTKKKKKVRPLSREITMSQAYQNMCAGMFKTMVAFDMDGKVRKPKFELDSEQVRYEHRFAPFNSVMTPP
PVHYLQFKEMSDLNKYSPPPQSPELYVAASKHFQQAKMILENIPNPDHEVNRILKVAKPNFVVMKLLAGG
HKKESKVPPEFDFSAHKYFPVVKLV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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