NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS10521.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10521.1 Public Homo sapiens 16 DNAAF8 24 110 108 CCDS HistoryNCBI Gene:146562Re-query CCDS DB by CCDS ID:10521.1Re-query CCDS DB by GeneID:146562See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10521.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000299320.10 ENSP00000299320.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000299320.10Link to Ensembl Protein Viewer:ENSP00000299320.4Re-query CCDS DB by Nucleotide ID:ENST00000299320Re-query CCDS DB by Protein ID:ENSP00000299320
Original member Current member NCBI NM_139170.3 NP_631909.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_139170.3Link to Protein Sequence:NP_631909.2Re-query CCDS DB by Nucleotide ID:NM_139170Re-query CCDS DB by Protein ID:NP_631909Link to BLAST:NP_631909.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_631909.2 520 Q8IYS4 520 100% 0 0

Chromosomal Locations for CCDS 10521.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 4736515 4736643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4737800 4737946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4740153 4740659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4743043 4743160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4744870 4745011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4746375 4746512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4746927 4747025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4747343 4747625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1563 nt):
ATGGCATCCAACGATAAAGGCATGGCACCCTCGCTGGGCTCTCCCTGGGCCTCCCAGATGGGGCCCTGGG
ATGCCATCCTCAAGGCTGTCAAAGACCAGCTCCCGTCTCTGGACTCAGACTCCCCTTTGTCGGACTATGG
GGAAGAGGAGCTGTTCATCTTCCAGCGAAACCAAACCTCCCTGATTCCAGACCTGTCGGAGGAGCTGGCT
GAAGATCCTGCCGATGGCGACAAGTCCAGGGCCTGGGTCGCTGCAGCTGAAGAGTCCCTTCCCGAGCCAG
TTCTGGTGCCTGCAGAATTGGCCACAGAACCTGGGTGCAGACAGAACACAAGGACAAAGGATGCATCCTC
TCAGGAAGGAAGAGACCCTGGCAGGCCTTTTGAAAGCTCTGGTGAGGTCAGCGCTCTTCTTGGGATGGCC
GAGGAGCCCCCCAGGTGGCTGGAAGGCGACCTTGGAAGCCTGTCTTTCAACACCAAAGGATCCCAGGGTC
CTCCCTGGGACCCACAGGCCGAAGCCACTCTCTCCTGCCATGAAGGAGACCCAAAGGCAGAGCCCCTCAG
CACTGCCTCACAAGAATCTGTGAACCGCCGGGCCCTCCGACAGGAGAGAAGGAAGATGATAGAGACGGAC
ATCCTCCAGAAAGTCACCCGGGATGCCTGCGGCCCGACCAGCAGTGACAAAGGTGGGGTGAAGGAGGCGC
CCTGCCACGCTGCGGAGTCAGCTCCCAGATCCAAAATGCCCCTCGTGGAGCCTCCGGAGGGACCACCAGT
GCTCTCGCTCCAGCAACTTGAAGCGTGGGATTTGGATGACATCCTTCAGAGTCTGGCGGGACAAGAAGAC
AACCAGGGAAATCGTGCACCTGGAACTGTGTGGTGGGCAGCTGACCACCGCCAAGTTCAAGACCGCATGG
TGCCGAGCGCCCACAACAGGCTCATGGAACAGCTGGCCCTCCTGTGCACCACGCAGTCCAAGGCCTCTGC
TTGTGCCCGGAAGGTGCCTGCCGACACTCCCCAGGACACCAAAGAGGCAGATTCAGGAAGCAGATGTGCC
TCAAGGAAGCAGGGCTCCCAGGCTGGGCCAGGCCCGCAGCTGGCCCAGGGCATGAGGCTTAACGCAGAGT
CCCCCACCATCTTTATTGACCTGCGGCAGATGGAGCTACCAGACCACCTGTCCCCAGAAAGCTCCAGCCA
CAGCTCCTCTGACAGTGAGGAGGAGGAGGAGGAAGAGATGGCAGCTCTGGGAGACGCAGAGGGGGCATCT
CCTTCCTCCCTGGGGCTACGGACCTGTACCGGGAAAAGCCAGCTTCTCCAGCAGCTCAGGGCCTTTCAGA
AGGGGACAGCCCAGCCCGAGCTGCCTGCCAGCAAGGGGCCCGCGGGTGGGAGGGCTCAGGCCCCTGAAGA
CACAGCTGGATCACGAACTGGGAGGAAGCAACACATGAAGCTCTGTGCCAAGGGGCAGAGCGCCCAGGCT
CGACTCCCAAGAGGCAGGCCCAGAGCCCTGGGGGATGTTCCTGAGCCAGGGGCAGCCAGGGAGGCCCTGA
TGCCTCCTCTGGAGCAACTATAG

Translation (520 aa):
MASNDKGMAPSLGSPWASQMGPWDAILKAVKDQLPSLDSDSPLSDYGEEELFIFQRNQTSLIPDLSEELA
EDPADGDKSRAWVAAAEESLPEPVLVPAELATEPGCRQNTRTKDASSQEGRDPGRPFESSGEVSALLGMA
EEPPRWLEGDLGSLSFNTKGSQGPPWDPQAEATLSCHEGDPKAEPLSTASQESVNRRALRQERRKMIETD
ILQKVTRDACGPTSSDKGGVKEAPCHAAESAPRSKMPLVEPPEGPPVLSLQQLEAWDLDDILQSLAGQED
NQGNRAPGTVWWAADHRQVQDRMVPSAHNRLMEQLALLCTTQSKASACARKVPADTPQDTKEADSGSRCA
SRKQGSQAGPGPQLAQGMRLNAESPTIFIDLRQMELPDHLSPESSSHSSSDSEEEEEEEMAALGDAEGAS
PSSLGLRTCTGKSQLLQQLRAFQKGTAQPELPASKGPAGGRAQAPEDTAGSRTGRKQHMKLCAKGQSAQA
RLPRGRPRALGDVPEPGAAREALMPPLEQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH