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Report for CCDS71884.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
71884.1 Public Mus musculus 7 Zfp865 23 108 98 CCDS HistoryNCBI Gene:319748Re-query CCDS DB by CCDS ID:71884.1Re-query CCDS DB by GeneID:319748See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 71884.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000085427.5 ENSMUSP00000082550.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000085427.5Link to Ensembl Protein Viewer:ENSMUSP00000082550.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000085427Re-query CCDS DB by Protein ID:ENSMUSP00000082550
Original member Current member NCBI NM_001290426.1 NP_001277355.1 Accepted alive Link to Nucleotide Sequence:NM_001290426.1Link to Protein Sequence:NP_001277355.1Re-query CCDS DB by Nucleotide ID:NM_001290426Re-query CCDS DB by Protein ID:NP_001277355Link to BLAST:NP_001277355.1

Chromosomal Locations for CCDS 71884.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 5029018 5031279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5032763 5032771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2271 nt):
ATGGAGGCAAACCAGGCAGGCAGCGGTGCCGGGGGTGGCGGGAGCAGCGGCATCGGGGGCGAGGACGGGG
TCCACTTCCAGAGTTACCCATTTGACTTCCTGGAATTCCTCAACCACCAGCGCTTTGAGCCCATGGAGCT
ATACGGGGAACACGCCAAGGCAGTGGCAGCCCTGCCCTGTACCCCGGGGCCCCCGCCCCAGCCCCCACCC
CAGCCTCCTCCACCCCAATATGACTACCCACCCCAGTCCAGTTTCAAACCCAAGGCGGAGGCTCCTTCCT
CATCTTCATCATCATCTTCATCATCATCTTCCTCATCTTCGTCTTCCTCATCCTCTTCCCAAGCCAAGAA
GATGGATCCGCCTTTGCCACCCACCTTCGGGGCACCTCCCCCTCCACTCTTTGATGCTGCCTTCCCTGCT
CCGCAATGGGGAATAGTCGACCTCTCTGGACACCAGCACCTGTTCGGGAACCTGAAACGTGGTGGGCCCA
CCCCTGGGCCTGGAGTAGCATCAGGACTGGGCACTCCCACTGGGACCCCAGGGCCACTTACCACACCCTC
GCAGACCCCGCCTGGGCCCGCAGTAGGGGCAGCCTGCGACCCAACCAAGGACGACAAGGGCTATTTCCGA
AGGCTGAAGTACCTGATGGAGCGACGCTTCCCGTGTGGTGTTTGCCAGAAGTCCTTCAAACAGTCCTCAC
ATCTGGTCCAGCACATGTTAGTGCACTCCGGGGAACGACCATACGAATGCGGCATCTGTGGCCGCACCTA
CAACCATGTCTCCAGTCTCATCCGCCACCGACGCTGCCACAAGGATGTGCCACCAACACCAACTGGAGGT
ACGCCACAGCCTGGGCCCGCACTCCCTTCACTGGGCCTCCCGGTATCCACAGCCAGTGCCACAGCCAGCT
CTGACCCCGCCGCAGTGTCCTCTGGCCCCTCAGCCACCCCTGCAACGCCTGCCACCTCCACTGATGGGAA
CACCACCCCTGCTGCCCCACCCGGGGTGGCCATGCCTCCCTCTGCCACTACTGGCGGTGATGGCCCATTT
GCCTGCTCCCTCTGCTGGAAGGTCTTCAAGAAGCCTAGCCACCTCCACCAGCACCAGATCATCCACACGG
GTGAGAAACCCTTCTCCTGCTCCGTGTGCAGCAAAAGCTTCAACCGGAGGGAGAGCCTCAAACGTCACGT
GAAAACGCACTCGGCCGACTTGCTGCGCCTGCCCTGTGGCATCTGTGGCAAGGTCTTCCGCGATGCTTCC
TACCTCCTCAAGCACCAGGCAGCCCACGCAGCGGCCGGGACTCCGCGGCCGGTGTACCCCTGCGACCTGT
GCGGGAAAACATACTCCGCACCGCAGAGCCTGCTGCGACACAAGGCTGCCCACGCACCACCTGTGGCCAC
GGAGCCGGCAAAGGACGGGGCTGCCTCGGTCCCACAGCCACCACCTCCCTTCCCCCCAGGTCCTTACCTC
CTGCCCGCGGACCCATCCACTACCGACGAGAAAGCCACAGCGGCCGCAGCGGCTGTGGTGTATGGTGCGG
TGCCTGTCCCACTTCTCAGCGCGCATCCGCTGCTGCTCGGCGGTGCGGGGAATGGTGGTGCTGGAGGCCC
GGGCGCAGGCGGCCCCAGCAAGACGTTCTGCTGTGGCATCTGTGGGCGCGCGTTTGGGCGCCGCGAGACC
CTGAAGCGCCACGAGCGCATCCACACCGGCGAGAAGCCCCACCAGTGCCCGGTGTGCGGGAAGCGTTTCC
GGGAGTCCTTCCATCTGAGCAAGCACCACGTGGTGCACACCCGAGAGCGGCCCTACAAGTGCGAGTTGTG
CGGCAAGGTCTTCGGCTACCCGCAGAGCCTCACACGCCACCGCCAGGTGCATCGGCTCCAATTGCCCTGC
GCCCTGGCCGGAGCCACAGGCCTCGCCACCGGCCAGGGGACCACTGGGGCCTGTGGACCCGGAGCTGCAG
GCACTTCAGGTGGGCCGGCCGACCTGAGCTATGCCTGCTCAGACTGCGGGGAGCACTTCCCGGATCTCTT
CCACGTCATGAGTCACAAGGAAGCTCACATGTCAGAGAAGCCGTATGGCTGTGACGCCTGCGGCAAGACG
TTCGGTTTCATCGAGAACCTCATGTGGCACAAGCTGGTTCACCAGGCTGCCCCGGAGCGCCTTCTAGCGC
CAACACCCAGTGGCCCCCAGTCTTCTGATGGCGGCAGCAGCGGCGGCGGCACCGATGCATCCAGCGTGCT
GGACAACGGACTGGCCGGAGAGGTTGAGTGA

Translation (756 aa):
MEANQAGSGAGGGGSSGIGGEDGVHFQSYPFDFLEFLNHQRFEPMELYGEHAKAVAALPCTPGPPPQPPP
QPPPPQYDYPPQSSFKPKAEAPSSSSSSSSSSSSSSSSSSSSSQAKKMDPPLPPTFGAPPPPLFDAAFPA
PQWGIVDLSGHQHLFGNLKRGGPTPGPGVASGLGTPTGTPGPLTTPSQTPPGPAVGAACDPTKDDKGYFR
RLKYLMERRFPCGVCQKSFKQSSHLVQHMLVHSGERPYECGICGRTYNHVSSLIRHRRCHKDVPPTPTGG
TPQPGPALPSLGLPVSTASATASSDPAAVSSGPSATPATPATSTDGNTTPAAPPGVAMPPSATTGGDGPF
ACSLCWKVFKKPSHLHQHQIIHTGEKPFSCSVCSKSFNRRESLKRHVKTHSADLLRLPCGICGKVFRDAS
YLLKHQAAHAAAGTPRPVYPCDLCGKTYSAPQSLLRHKAAHAPPVATEPAKDGAASVPQPPPPFPPGPYL
LPADPSTTDEKATAAAAAVVYGAVPVPLLSAHPLLLGGAGNGGAGGPGAGGPSKTFCCGICGRAFGRRET
LKRHERIHTGEKPHQCPVCGKRFRESFHLSKHHVVHTRERPYKCELCGKVFGYPQSLTRHRQVHRLQLPC
ALAGATGLATGQGTTGACGPGAAGTSGGPADLSYACSDCGEHFPDLFHVMSHKEAHMSEKPYGCDACGKT
FGFIENLMWHKLVHQAAPERLLAPTPSGPQSSDGGSSGGGTDASSVLDNGLAGEVE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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