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Report for CCDS76665.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76665.1 Public Homo sapiens 14 SDR39U1 24 110 108 CCDS HistoryNCBI Gene:56948Re-query CCDS DB by CCDS ID:76665.1Re-query CCDS DB by GeneID:56948See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76665.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000538105.6 ENSP00000446077.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000538105.6Link to Ensembl Protein Viewer:ENSP00000446077.2Re-query CCDS DB by Nucleotide ID:ENST00000538105Re-query CCDS DB by Protein ID:ENSP00000446077
Original member Current member NCBI NM_001290292.3 NP_001277221.1 Accepted alive Link to Nucleotide Sequence:NM_001290292.3Link to Protein Sequence:NP_001277221.1Re-query CCDS DB by Nucleotide ID:NM_001290292Re-query CCDS DB by Protein ID:NP_001277221Link to BLAST:NP_001277221.1
Original member Current member NCBI NM_001308075.2 NP_001295004.1 Accepted alive Link to Nucleotide Sequence:NM_001308075.2Link to Protein Sequence:NP_001295004.1Re-query CCDS DB by Nucleotide ID:NM_001308075Re-query CCDS DB by Protein ID:NP_001295004Link to BLAST:NP_001295004.1

Chromosomal Locations for CCDS 76665.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24440083 24440492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24440783 24440926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24442178 24442259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (636 nt):
ATGAGCTCGCTGCATCGGGGCTGCCGAGCTGCGATGCCGCCGTCAACCTGGCCGGAGAGAACATCCTCAA
CCCTCTCCGAAGCTTACTACCAGCCCAGTCTGACTGCGGAGTATGATGAAGACAGCCCAGGAGGGGACTT
TGACTTTTTCTCCAACCTCGTAACCAAATGGGAAGCTGCAGCCAGGCTTCCTGGAGATTCTACACGCCAG
GTGGTGGTGCGCTCAGGGGTTGTGCTGGGCCGTGGGGGTGGTGCCATGGGCCACATGCTGCTGCCCTTTC
GCCTGGGCCTGGGGGGCCCCATCGGCTCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCTGGC
AGGAATCCTGACCCATGCCCTTGAAGCAAACCACGTGCACGGGGTCCTGAATGGAGTGGCTCCATCCTCC
GCCACTAATGCTGAGTTTGCCCAGACCTTGGGTGCTGCCCTGGGCCGCCGAGCCTTCATCCCTCTCCCCA
GCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGCCAGAAGGTGATCCC
ACAGCGAACACTGGCCACTGGCTACCAGTATTCCTTCCCAGAGCTAGGGGCTGCCTTAAAGGAAATTGTA
GCCTAA

Translation (211 aa):
MSSLHRGCRAAMPPSTWPERTSSTLSEAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAARLPGDSTRQ
VVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGVLNGVAPSS
ATNAEFAQTLGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPQRTLATGYQYSFPELGAALKEIV
A


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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