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Report for CCDS27202.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27202.1 Public Mus musculus 14 Tdh 23 108 98 CCDS HistoryNCBI Gene:58865Re-query CCDS DB by CCDS ID:27202.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27202.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022522.14 ENSMUSP00000022522.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022522.14Link to Ensembl Protein Viewer:ENSMUSP00000022522.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000022522Re-query CCDS DB by Protein ID:ENSMUSP00000022522
Original member Current member NCBI NM_021480.5 NP_067455.5 Accepted alive Link to Nucleotide Sequence:NM_021480.5Link to Protein Sequence:NP_067455.5Re-query CCDS DB by Nucleotide ID:NM_021480Re-query CCDS DB by Protein ID:NP_067455Link to BLAST:NP_067455.5

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067455.5 373 Q8K3F7 373 100% 0 0

Chromosomal Locations for CCDS 27202.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 63492707 63492846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63493742 63494011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63494357 63494447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63495720 63495892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63495990 63496139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63496945 63497015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63497598 63497640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63500121 63500304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1122 nt):
ATGCTATTCCTTGGGATGCTAAAACAGGTGGTCAATGGGACTGCACAGAGCAAAGCCTCTAGCTGCCGGA
AGCTTGTCTTGCCCTTGAAGTTTCTAGGCACCTCCCAGCACCGGATCCCAGCCGATGCCAACTTCCACTC
CACCTCGATCTCGGAAGCTGAGCCTCCTCGGGTCTTGATCACAGGGGGTCTTGGCCAGCTGGGAGTAGGA
CTTGCTAACCTCCTGAGGAAACGATTTGGGAAGGACAATGTGATCCTATCAGACATAAGGAAGCCCCCTG
CTCATGTCTTCCACAGTGGCCCGTTTGTTTATGCCAACATCTTGGATTACAAGAGCCTCCGTGAGATCGT
GGTGAACCACCGTATCAGCTGGCTGTTTCACTACAGTGCCCTGCTGAGTGCCGTGGGAGAGGCAAATGTG
TCCTTAGCCAGAGATGTGAATATAACTGGATTGCATAACGTTCTAGATGTTGCAGCTGAATACAACGTGA
GATTGTTTGTGCCCAGCACGATTGGAGCCTTTGGACCTACCTCTCCCCGGAACCCTGCACCCGATCTCTG
TATTCAAAGGCCTAGGACCATCTATGGGGTATCCAAGGTCCACACAGAGCTCATGGGAGAATACTATTAT
TACCGGTACGGGTTAGATTTTCGGTGCCTGCGTTATCCTGGAATCATTTCTGCAGATTCCCAGCCTGGAG
GAGGAACAACTGACTACGCCGTCCAGATTTTCCACGCTGCAGCAAAGAACGGCACATTCGAGTGCAACCT
CGAGGCTGGCACCAGGCTCCCAATGATGTACATCAGTGACTGCCTCAGGGCCACCCTGGAGGTCATGGAA
GCCCCTGCCGAGCGCCTGTCCATGAGAACCTACAACATCAGCGCCATGAGCTTCACCCCCGAAGAGCTGG
CCCAGGCGCTCCGCAAGCACGCGCCTGACTTCCAGATCACCTACTGCGTGGATCCCCTCCGACAGGCCAT
AGCGGAGAGCTGGCCCATGATTCTAGATGACAGCAATGCTCGGAAGGACTGGGGCTGGAAGCATGACTTT
GATCTTCCAGAGTTGGTGGCTACGATGCTCAACTTCCACGGCGTCAGCACCAGAGTTGCCCAAGTGAACT
AA

Translation (373 aa):
MLFLGMLKQVVNGTAQSKASSCRKLVLPLKFLGTSQHRIPADANFHSTSISEAEPPRVLITGGLGQLGVG
LANLLRKRFGKDNVILSDIRKPPAHVFHSGPFVYANILDYKSLREIVVNHRISWLFHYSALLSAVGEANV
SLARDVNITGLHNVLDVAAEYNVRLFVPSTIGAFGPTSPRNPAPDLCIQRPRTIYGVSKVHTELMGEYYY
YRYGLDFRCLRYPGIISADSQPGGGTTDYAVQIFHAAAKNGTFECNLEAGTRLPMMYISDCLRATLEVME
APAERLSMRTYNISAMSFTPEELAQALRKHAPDFQITYCVDPLRQAIAESWPMILDDSNARKDWGWKHDF
DLPELVATMLNFHGVSTRVAQVN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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