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Report for CCDS21761.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21761.1 Public Mus musculus 7 Cyp2r1 23 108 98 CCDS HistoryNCBI Gene:244209Re-query CCDS DB by CCDS ID:21761.1Re-query CCDS DB by GeneID:244209See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21761.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032908.14 ENSMUSP00000032908.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032908.14Link to Ensembl Protein Viewer:ENSMUSP00000032908.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000032908Re-query CCDS DB by Protein ID:ENSMUSP00000032908
Original member Current member NCBI NM_177382.4 NP_796356.2 Accepted alive Link to Nucleotide Sequence:NM_177382.4Link to Protein Sequence:NP_796356.2Re-query CCDS DB by Nucleotide ID:NM_177382Re-query CCDS DB by Protein ID:NP_796356Link to BLAST:NP_796356.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_796356.2 501 Q6VVW9 501 100% 0 0

Chromosomal Locations for CCDS 21761.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 114550272 114550447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 114551753 114552082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 114552721 114553353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 114554591 114554732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 114562733 114562957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1506 nt):
ATGTTGGAGCTACCGGGAGCCCGGGCGTGCGCTGGGGCGCTCGCGGGCGCTCTCCTGCTGCTGCTCTTCG
TGCTGGTGGTCCGCCAGCTGCTGAGGCAGAGGCGACCGGCGGGCTTCCCCCCGGGTCCTCCGCGGCTGCC
ATTTGTCGGCAACATCTGCTCCCTGGCCTTGTCGGCCGATCTTCCCCACGTCTACATGAGGAAGCAGAGC
CGGGTGTATGGCGAGATTTTCAGTTTAGATCTTGGAGGCATATCAACTGTCGTTCTAAATGGCTATGATG
TAGTAAAGGAATGCCTTGTTCATCAAAGTGAAATTTTTGCAGATAGACCATGCCTTCCTTTGTTCATGAA
GATGACAAAAATGGGAGGCTTACTCAATTCCAGATATGGTAGAGGATGGATTGATCACAGAAGGTTGGCT
GTTAACAGCTTTCATTATTTTGGAAGTGGCCAAAAATCTTTTGAATCTAAAATTTTAGAAGAAACTTGGT
CTTTAATTGATGCTATTGAAACATACAAAGGTGGACCTTTTGACCTCAAGCAACTGATAACAAATGCTGT
TTCAAACATAACTAACCTTATCCTTTTTGGAGAACGATTCACTTATGAAGACACTGATTTTCAGCACATG
ATTGAATTATTTAGTGAGAATGTGGAACTAGCTGCCAGTGCTCCAGTCTTCCTTTATAATGCATTTCCAT
GGATTGGCATCTTACCTTTTGGGAAACATCAAAGACTATTTAGAAATGCAGATGTGGTCTATGATTTCCT
CTCCAGACTTATTGAAAAAGCTGCAGTCAATAGAAAGCCTCATTTACCTCACCATTTTGTTGATGCCTAT
TTAGATGAGATGGATCAAGGTCAAAATGATCCTTTATCTACATTTTCCAAAGAGAATCTAATTTTTTCAG
TGGGTGAACTCATCATTGCTGGAACTGAAACTACAACCAATGTGCTCCGCTGGGCAATTCTTTTCATGGC
CCTTTATCCTAATATTCAAGGACAAGTTCATAAAGAGATTGATTTAATTGTGGGCCACAACAGGAGACCT
TCTTGGGAATACAAATGCAAAATGCCTTATACTGAAGCAGTTTTACATGAAGTTTTAAGATTCTGTAATA
TAGTTCCACTGGGAATTTTCCATGCAACTTCGGAAGATGCAGTTGTACGTGGCTATTCCATTCCTAAAGG
CACAACAGTCATTACAAATCTTTATTCTGTTCACTTTGATGAAAAGTACTGGAAAGATCCAGACATGTTC
TATCCTGAGCGATTTCTGGACAGCAATGGATATTTTACTAAAAAGGAAGCTTTGATTCCTTTTTCTCTAG
GGAGAAGACATTGTCTTGGAGAACAGCTGGCTCGAATGGAAATGTTCTTGTTTTTTACATCATTACTTCA
GCAATTTCATTTGCATTTTCCACATGAACTAGTTCCAAATCTGAAGCCCAGGTTGGGCATGACATTACAA
CCCCAGCCCTACCTCATCTGTGCAGAAAGACGCTGA

Translation (501 aa):
MLELPGARACAGALAGALLLLLFVLVVRQLLRQRRPAGFPPGPPRLPFVGNICSLALSADLPHVYMRKQS
RVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMGGLLNSRYGRGWIDHRRLA
VNSFHYFGSGQKSFESKILEETWSLIDAIETYKGGPFDLKQLITNAVSNITNLILFGERFTYEDTDFQHM
IELFSENVELAASAPVFLYNAFPWIGILPFGKHQRLFRNADVVYDFLSRLIEKAAVNRKPHLPHHFVDAY
LDEMDQGQNDPLSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVHKEIDLIVGHNRRP
SWEYKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWKDPDMF
YPERFLDSNGYFTKKEALIPFSLGRRHCLGEQLARMEMFLFFTSLLQQFHLHFPHELVPNLKPRLGMTLQ
PQPYLICAERR


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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