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Report for CCDS23643.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
23643.1 |
Public |
Mus musculus |
9 |
Pomgnt2 |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 23643.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000084743.6 |
ENSMUSP00000095868.3 |
Accepted |
alive |
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EBI |
ENSMUST00000216669.1 |
ENSMUSP00000149077.1 |
Accepted |
alive |
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EBI |
ENSMUST00000217610.1 |
ENSMUSP00000149753.1 |
Accepted |
alive |
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NCBI |
NM_001289558.1 |
NP_001276487.1 |
Updated |
not alive |
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NCBI |
NM_001289558.2 |
NP_001276487.1 |
Accepted |
alive |
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NCBI |
NM_001289559.1 |
NP_001276488.1 |
Updated |
not alive |
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NCBI |
NM_001289559.2 |
NP_001276488.1 |
Accepted |
alive |
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NCBI |
NM_001289560.1 |
NP_001276489.1 |
Updated |
not alive |
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NCBI |
NM_001289560.2 |
NP_001276489.1 |
Accepted |
alive |
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NCBI |
NM_153540.4 |
NP_705768.4 |
Updated |
not alive |
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NCBI |
NM_153540.5 |
NP_705768.4 |
Accepted |
alive |
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Chromosomal Locations for CCDS 23643.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1743 nt): ATGCACCTCTCTGCCGTATTCAACGCCCTCCTGGTATCAGTGCTGGCTGCGGTCCTGTGGAAGCATGTTC GGTTGCGGGAGCATGCGGCCACGCTAGAGGAGGAGCTGGCCCTTGGACAGCAGTCCCTGGATCCAGTCCT AGGACTGAAGATCGACTACCCGAAGGCCCTGCAGATCCTCATGGAGGGCGGCACCCACATGGTGTGCACA GGCCGCACCCACACGGACCGCATCTGCCGCTTCAAGTGGCTCTGCTACTCCAATGAGGCCGAAGAATTCA TCTTTTTCCATGGCAACTCATCTGTGATGCTGCCCAACCTGGGCTCCCGGCGCTTCCAGCCGGCCCTGCT GGACCTGTCCACTGTGGAGGACCATAATGCCCAGTACTTCAACTTCGTGGAGCTGCCCGCTGCAGCCCTG CGCTTCATGCCAAAGCCAGTGTTCGTGCCTGATGTAGCCCTCATCGCCAACCGCTTCAACCCCGATAACC TCATGCACGTCTTTCATGATGACCTGCTCCCACTCTTCTACACACTGAGGCAGTTCCCCGGCCTGGCCCA AGAGGCCCGGCTCTTTTTCATGGAGGGATGGGGTGAGGGTGCCCACTTTGACCTCTATAAACTCCTCAGC CCCAAGCAGCCGCTTCTACGTGCACAGCTCAAGACACTGGGCCGACTGCTCTGCTTTTCCCATGCTTTCG TGGGCCTGTCCAAGGTTACCACCTGGTACCAATACGGCTTTGTACAGCCCCAGGGCCCAAAAGCCAACAT CCTGGTCTCTGGCAATGAGATCCGGCAGTTCACGCGCTTCATGACTGAAAGGCTGAACGTGAGCCACGCG GGGGCGCCCCTGGGGGAGGAATACATTCTGGTCTTCAGTCGCACCCAGAACAGACTCATCCTGAACGAGG CAGAGCTGTTGCTGGAGCTGGCACAAGAGTTCCAGATGAAGACGGTTACAGTGTCCCTGGAGGACCACAC CTTTGCTGATGTCGTGCGGCTGGTCAGCAATGCCTCCATGTTGGTCAGCATGCATGGGGCCCAGCTGGTT ACGGCCCTCTTCCTGCCCCGCGGGGCTACCGTGGTTGAACTCTTCCCTTACGCTGTCAATCCTGACCACT ACACCCCCTATAAGACGCTGGCCACACTGCCTGGCATGGACCTGCAGTATGTAGCCTGGCGAAACATGAT CCGGGAGAACACAGTCACACACCCTGAGCGACCGTGGGACCAAGGGGGCATCACCCACCTGGACCGGGCT GAGCAGGCCCGTATCCTGCAGAGCCGAGAGGTCCCCCGGCATCTCTGTTGCCGGAACCCAGAGTGGCTAT TCCGAATCTACCAGGACACCAGGGTGGACATCCCATCCCTTATGCAATCCATTCGGCGTGTGGTGAAGGG CCGGCCGGGGCCACGGAGGCAGAGGTGGGCAATCAGCCTGTACCCGGGCAAGGTGCGGGAGGCTCGATGT CAGGCGTCAGTGCAGGGTGCCACCGAGGCCCGCCTGTCTGTGTCCTGGCAGATCCCGTGGAACCTCAAGT ACCTGAAAGTGAGGGAGGTGAAATACGAGGTGTGGCTGCAGGAGCAAGGGGAGAACACGTATGTGCCTTA CATGCTGACCCTGCAGAACCACACCTTCACAGAGAACATCAAACCTTTTACCACCTACCTGGTGTGGGTC CGCTGTATATTTAACAGGAGCCTCCTGGGACCTTTTGCAGATGTGCTGGTGTGCAGCACGTAG
Translation (580 aa): MHLSAVFNALLVSVLAAVLWKHVRLREHAATLEEELALGQQSLDPVLGLKIDYPKALQILMEGGTHMVCT GRTHTDRICRFKWLCYSNEAEEFIFFHGNSSVMLPNLGSRRFQPALLDLSTVEDHNAQYFNFVELPAAAL RFMPKPVFVPDVALIANRFNPDNLMHVFHDDLLPLFYTLRQFPGLAQEARLFFMEGWGEGAHFDLYKLLS PKQPLLRAQLKTLGRLLCFSHAFVGLSKVTTWYQYGFVQPQGPKANILVSGNEIRQFTRFMTERLNVSHA GAPLGEEYILVFSRTQNRLILNEAELLLELAQEFQMKTVTVSLEDHTFADVVRLVSNASMLVSMHGAQLV TALFLPRGATVVELFPYAVNPDHYTPYKTLATLPGMDLQYVAWRNMIRENTVTHPERPWDQGGITHLDRA EQARILQSREVPRHLCCRNPEWLFRIYQDTRVDIPSLMQSIRRVVKGRPGPRRQRWAISLYPGKVREARC QASVQGATEARLSVSWQIPWNLKYLKVREVKYEVWLQEQGENTYVPYMLTLQNHTFTENIKPFTTYLVWV RCIFNRSLLGPFADVLVCST
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