NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS70618.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
70618.1 Public Mus musculus 15 Rad1 23 108 98 CCDS HistoryNCBI Gene:19355Re-query CCDS DB by CCDS ID:70618.1Re-query CCDS DB by GeneID:19355See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 70618.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000100775.9 ENSMUSP00000098338.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100775.9Link to Ensembl Protein Viewer:ENSMUSP00000098338.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000100775Re-query CCDS DB by Protein ID:ENSMUSP00000098338
Original member Current member NCBI NM_001289448.1 NP_001276377.1 Accepted alive Link to Nucleotide Sequence:NM_001289448.1Link to Protein Sequence:NP_001276377.1Re-query CCDS DB by Nucleotide ID:NM_001289448Re-query CCDS DB by Protein ID:NP_001276377Link to BLAST:NP_001276377.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001276377.1 272 Q9QWZ1-2 272 100% 0 0

Chromosomal Locations for CCDS 70618.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 10486519 10486716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 10487990 10488098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 10490256 10490514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 10492765 10492863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 10495906 10496059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (819 nt):
ATGCCTCTCCTAACCCAGTACAATGAAGAGGAGTACGAACAGTACTGCTTAGTGGCCAGCCTTGACAACG
TT
AGGAATCTCTCCACTGTCTTGAAAGCCATTCATTTCAGAGAACACGCCACGTGTTTTGCTACCAAAAA
C
GGAATCAAGGTTACAGTGGAGAATGCAAAGTGTGTGCAAGCAAATGCCTTTATTCAGGCTGACGTGTTT
CAG
GAATTTGTCATTCAGGAAGAATCTGTTACTTTTCGAATTAACTTAACTATCCTTTTAGACTGTTTAT
CT
ATTTTTGGATCAAGTCCTACACCAGGGACTTTGACTGCGCTTCGGATGTGTTACCAAGGTTATGGTCA
C
CCACTGATGCTATTTCTAGAAGAAGGAGGAGTGGTGACGGTCTGCAAAATTACCACTCAGGAGCCTGAG
GAG
ACACTGGATTTTGATTTCTGCAGCACCAATGTTATGAATAAAATTATCCTGCAGTCAGAGGGGCTCC
GG
GAAGCCTTTTCTGAGCTGGACATGACAGGTGATGTCCTACAGATCACTGTGTCTCCTGACAAGCCCTA
T
TTCAGGTTGTCTACTTTTGGAAATGCAGGAAACTCCCATCTTGACTATCCCAAAGATTCCGACTTGGTG
GAA
GCCTTTCACTGTGATAAGACCCAGGTCAACAGAATTTCGGATGTAAAGTATTCCTGTAAAACATGGT
TG
CAGCTACCTGAAGGGGTAGGCTATGATCCTCTCAGCGGTTTGGAGTGGACTCTTTCAGAACGCGATGG
A
GAGCAGGAGGTGGCTCAGTGGGTAAACGTGGTCCCTGTGCAAGCTTGA


Translation (272 aa):
MPLLTQYNEEEYEQYCLVASLDNVRNLSTVLKAIHFREHATCFATKNGIKVTVENAKCVQANAFIQADVF
Q
EFVIQEESVTFRINLTILLDCLSIFGSSPTP
GTLTALRMCYQGYGHPLMLFLEEGGVVTVCKITTQEPE
E
TLDFDFCSTNVMNKIILQSEGLREAFSELDMTGDVLQITVSPDKPYF
RLSTFGNAGNSHLDYPKDSDLV
E
AFHCDKTQVN
RISDVKYSCKTWLQLPEGVGYDPLSGLEWTLSERDGEQEVAQWVNVVPVQA



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser