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Report for CCDS2721.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2721.1 Public Homo sapiens 3 KIAA1143 24 110 108 CCDS HistoryNCBI Gene:57456Re-query CCDS DB by CCDS ID:2721.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2721.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000296121.6 ENSP00000296121.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000296121.6Link to Ensembl Protein Viewer:ENSP00000296121.4Re-query CCDS DB by Nucleotide ID:ENST00000296121Re-query CCDS DB by Protein ID:ENSP00000296121
Original member Current member NCBI NM_020696.4 NP_065747.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020696.4Link to Protein Sequence:NP_065747.1Re-query CCDS DB by Nucleotide ID:NM_020696Re-query CCDS DB by Protein ID:NP_065747Link to BLAST:NP_065747.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065747.1 154 Q96AT1 154 100% 0 0

Chromosomal Locations for CCDS 2721.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 44753341 44753552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 44754224 44754368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 44761495 44761602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (465 nt):
ATGAGCAAGCGGAACCAGGTATCGTACGTGCGGCCAGCCGAGCCGGCGTTTCTGGCCCGCTTCAAGGAAC
GGGTCGGCTACAGGGAGGGACCCACCGTAGAGACTAAGAGAATTCAGCCTCAGCCCCCAGATGAAGATGG
GGATCACAGTGACAAAGAAGATGAACAGCCTCAAGTGGTGGTTTTAAAAAAGGGAGACCTGTCAGTTGAA
GAAGTCATGAAAATTAAAGCAGAAATAAAGGCTGCCAAAGCAGATGAAGAACCAACTCCAGCCGATGGAA
GAATCATATATCGAAAACCAGTCAAGCATCCCTCAGATGAAAAATATTCAGGTTTAACAGCAAGCTCAAA
AAAGAAGAAGCCAAATGAAGATGAAGTAAATCAGGACTCGGTCAAAAAGAACTCACAAAAACAAATTAAA
AATAGTAGCCTCCTTTCTTTTGACAACGAAGATGAAAATGAGTAA

Translation (154 aa):
MSKRNQVSYVRPAEPAFLARFKERVGYREGPTVETKRIQPQPPDEDGDHSDKEDEQPQVVVLKKGDLSVE
EVMKIKAEIKAAKADEEPTPADGRIIYRKPVKHPSDEKYSGLTASSKKKKPNEDEVNQDSVKKNSQKQIK
NSSLLSFDNEDENE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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