CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS5189.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
5189.2 |
Public |
Homo sapiens |
6 |
ARFGEF3 |
24 |
110 |
108 |
|
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 5189.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENST00000251691.5 |
ENSP00000251691.4 |
MANE Select |
Accepted |
alive |
|
|
|
NCBI |
NM_020340.5 |
NP_065073.3 |
MANE Select |
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_065073.3 |
2177 |
Q5TH69 |
2177 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 5189.2
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6534 nt): ATGGAAGAAATCCTGAGGAAGCTGCAGAAGGAGGCGTCCGGGAGCAAGTACAAAGCCATCAAGGAGAGCT GCACCTGGGCCCTGGAAACTCTAGGTGGTCTGGATACCATTGTCAAGATCCCTCCACATGTACTGAGGGA GAAATGCCTGCTGCCTCTCCAGTTGGCTTTGGAATCCAAGAATGTGAAGCTGGCCCAACATGCTTTGGCA GGGATGCAGAAGCTTCTGTCGGAAGAGAGGTTTGTATCCATGGAAACAGATTCTGATGAGAAGCAGCTGC TCAATCAGATACTGAATGCCGTGAAAGTGACGCCTTCGCTCAACGAGGACCTGCAGGTGGAAGTGATGAA GGTTTTACTATGCATCACCTACACGCCAACATTTGATCTGAATGGGAGTGCCGTGCTGAAGATCGCGGAG GTGTGCATTGAGACGTACATAAGCAGCTGTCACCAGCGTAGCATAAACACTGCTGTGCGGGCAACTCTCA GTCAAATGCTGAGTGACTTGACTTTACAGTTACGACAGAGGCAGGAGAATACGATAATTGAAAACCCAGA TGTCCCACAGGATTTCGGGAATCAAGGGTCAACAGTAGAGTCCCTCTGTGATGATGTTGTCTCTGTACTC ACCGTCCTGTGTGAGAAGCTGCAAGCCGCCATAAATGACAGCCAGCAGCTGCAGCTTCTCTACCTGGAGT GCATCCTGTCTGTGCTCAGCAGCTCCTCCTCCTCCATGCACCTGCACAGGCGCTTCACGGACCTGATCTG GAAAAACCTCTGCCCTGCTCTCATCGTGATCTTGGGGAATCCAATTCATGACAAAACCATCACCTCTGCT CACACCAGCAGCACCAGTACCAGCCTGGAGTCGGACTCTGCGTCTCCGGGAGTGTCTGACCACGGCCGAG GATCAGGCTGCTCCTGCACTGCGCCGGCCCTGAGCGGACCTGTGGCTCGGACTATCTATTACATCGCAGC CGAGCTGGTCCGGCTGGTGGGGTCTGTGGACTCCATGAAGCCCGTGCTCCAGTCCCTCTACCACCGAGTG CTGCTCTACCCCCCACCCCAGCACCGGGTGGAAGCCATCAAAATAATGAAAGAGATACTTGGGAGCCCAC AGCGTCTCTGTGACTTGGCAGGACCCAGCTCCACTGAATCAGAGTCCAGAAAAAGATCAATTTCAAAAAG AAAGTCTCATCTGGATCTCCTCAAACTCATCATGGATGGCATGACCGAAGCATGCATCAAGGGTGGCATC GAAGCTTGCTATGCAGCCGTGTCCTGTGTCTGCACCTTGCTGGGTGCCCTGGATGAGCTCAGCCAGGGGA AGGGCTTGAGCGAAGGTCAGGTGCAACTGCTGCTTCTGCGCCTTGAGGAGCTGAAGGATGGGGCTGAGTG GAGCCGAGATTCCATGGAGATCAATGAGGCTGACTTCCGCTGGCAGCGGCGAGTGCTGTCCTCAGAACAC ACGCCGTGGGAGTCAGGGAACGAGAGGAGCCTTGACATCAGCATCAGTGTCACCACAGACACAGGCCAGA CCACTCTCGAGGGAGAGTTGGGTCAGACTACACCCGAGGACCATTCGGGAAACCACAAGAACAGTCTCAA GTCGCCAGCCATCCCAGAGGGTAAGGAGACGCTGAGCAAAGTATTGGAAACAGAGGCGGTAGACCAGCCA GATGTCGTGCAGAGAAGCCACACGGTCCCTTACCCTGACATAACTAACTTCCTGTCAGTAGACTGCAGGA CAAGGTCCTATGGATCTAGGTATAGTGAGAGCAATTTTAGCGTTGATGACCAAGACCTTTCTAGGACAGA GTTTGATTCCTGTGATCAGTACTCTATGGCAGCAGAAAAGGACTCGGGCAGGTCCGACGTGTCAGACATT GGGTCGGACAACTGTTCACTAGCCGATGAAGAGCAGACACCCCGGGACTGCCTAGGCCACCGGTCCCTGC GAACTGCCGCCCTGTCTCTAAAACTGCTGAAGAACCAGGAGGCGGATCAGCACAGCGCCAGGCTGTTCAT ACAGTCCCTGGAAGGCCTCCTCCCTCGGCTCCTGTCTCTCTCCAATGTAGAGGAGGTGGACACCGCTCTG CAGAACTTTGCCTCTACTTTCTGCTCAGGCATGATGCACTCTCCTGGCTTTGACGGGAATAGCAGCCTCA GCTTCCAGATGCTGATGAACGCAGACAGCCTCTACACAGCTGCACACTGCGCCCTGCTCCTCAACCTGAA GCTCTCCCACGGTGACTACTACAGGAAGCGGCCGACCCTGGCGCCAGGCGTGATGAAGGACTTCATGAAG CAGGTGCAGACCAGCGGCGTGCTGATGGTCTTCTCTCAGGCCTGGATTGAGGAGCTCTACCATCAGGTGC TCGACAGGAACATGCTTGGAGAGGCTGGCTATTGGGGCAGCCCAGAAGATAACAGCCTTCCCCTCATCAC AATGCTGACCGATATTGACGGCTTAGAGAGCAGTGCCATTGGTGGCCAGCTGATGGCCTCGGCTGCTACA GAGTCTCCTTTCGCCCAGAGCAGGAGAATTGATGACTCCACAGTGGCAGGCGTGGCATTTGCTCGCTATA TTCTGGTGGGCTGCTGGAAGAACTTGATCGATACTTTATCAACCCCACTGACTGGTCGAATGGCGGGGAG CTCCAAAGGGCTGGCCTTCATTCTGGGAGCTGAAGGCATCAAAGAGCAGAACCAGAAGGAGCGGGACGCC ATCTGCATGAGCCTCGACGGGCTGCGGAAAGCCGCACGGCTGAGCTGCGCTCTAGGCGTTGCTGCTAACT GCGCCTCAGCCCTTGCCCAGATGGCAGCTGCCTCCTGTGTCCAAGAAGAAAAAGAAGAGAGGGAGGCCCA AGAACCCAGTGATGCCATCACACAAGTGAAACTAAAAGTGGAGCAGAAACTGGAGCAGATTGGGAAGGTG CAGGGGGTGTGGCTGCACACTGCCCACGTCTTGTGCATGGAGGCCATCCTCAGCGTAGGCCTGGAGATGG GAAGCCACAACCCGGACTGCTGGCCACACGTGTTCAGGGTGTGTGAATACGTGGGCACCCTGGAGCACAA CCACTTCAGCGATGGTGCCTCGCAGCCCCCTCTGACCATCAGCCAGCCCCAGAAGGCCACTGGAAGCGCT GGCCTCCTTGGGGACCCCGAGTGTGAGGGCTCGCCCCCCGAGCACAGCCCGGAGCAGGGGCGCTCCCTGA GCACGGCCCCTGTCGTCCAGCCCCTGTCCATCCAGGACCTCGTCCGGGAAGGCAGCCGGGGTCGGGCCTC CGACTTCCGCGGCGGGAGCCTCATGAGCGGGAGCAGCGCGGCCAAGGTGGTGCTCACCCTCTCCACGCAA GCCGACAGGCTCTTTGAAGATGCTACGGATAAGTTGAACCTCATGGCCTTGGGAGGTTTTCTTTACCAGC TGAAGAAAGCATCGCAGTCTCAGCTTTTCCATTCTGTTACAGATACAGTTGATTACTCTCTGGCAATGCC AGGAGAAGTTAAATCCACTCAAGACCGAAAAAGCGCCCTCCACCTGTTCCGCCTGGGGAATGCCATGCTG AGGATTGTGCGGAGCAAAGCACGGCCCCTGCTCCACGTGATGCGCTGCTGGAGCCTTGTGGCCCCACACC TGGTGGAGGCTGCTTGCCATAAGGAAAGACATGTGTCTCAGAAGGCTGTTTCCTTCATCCATGACATACT GACAGAAGTCCTCACTGACTGGAATGAGCCACCTCATTTTCACTTCAATGAAGCACTCTTCCGACCTTTC GAGCGCATTATGCAGCTGGAATTGTGTGATGAGGACGTCCAAGACCAGGTTGTCACATCCATTGGTGAGC TGGTTGAAGTGTGTTCCACGCAGATCCAGTCGGGATGGAGACCCTTGTTCAGTGCCCTGGAAACAGTGCA TGGCGGGAACAAGTCAGAGATGAAGGAGTACCTGGTTGGTGACTACTCCATGGGAAAAGGCCAAGCTCCA GTGTTTGATGTATTTGAAGCTTTTCTCAATACTGACAACATCCAGGTCTTTGCTAATGCAGCCACTAGCT ACATCATGTGCCTTATGAAGTTTGTCAAAGGACTGGGGGAGGTGGACTGTAAAGAGATTGGAGACTGTGC CCCAGCACCCGGAGCCCCGTCCACAGACCTGTGCCTCCCGGCCCTGGATTACCTCAGGCGCTGCTCTCAG TTATTGGCCAAAATCTACAAAATGCCCTTGAAGCCAATATTCCTTAGTGGGAGACTTGCCGGCTTGCCTC GAAGACTTCAGGAACAGTCAGCCAGCAGTGAGGATGGAATTGAATCAGTCCTGTCTGATTTTGATGATGA CACCGGTCTGATAGAAGTCTGGATAATCCTGCTGGAGCAGCTGACAGCGGCTGTGTCCAATTGTCCACGG CAGCACCAACCACCAACTCTGGATTTACTCTTTGAGCTGTTGAGAGATGTGACGAAAACACCAGGACCAG GGTTTGGTATCTATGCAGTGGTTCACCTCCTCCTTCCTGTGATGTCCGTTTGGCTCCGCCGGAGCCATAA AGACCATTCCTACTGGGATATGGCCTCTGCCAATTTCAAGCACGCTATTGGTCTGTCCTGTGAGCTGGTG GTGGAGCACATTCAAAGCTTTCTACATTCAGATATCAGGTACGAGAGCATGATCAATACCATGCTGAAGG ACCTCTTTGAGTTGCTGGTCGCCTGTGTGGCCAAGCCCACTGAAACCATCTCCAGAGTGGGCTGCTCCTG TATTAGATACGTCCTTGTGACAGCGGGCCCTGTGTTCACTGAGGAGATGTGGAGGCTTGCCTGCTGTGCC CTGCAAGATGCGTTCTCTGCCACACTCAAGCCAGTGAAGGACCTGCTGGGCTGCTTCCACAGCGGCACGG AGAGCTTCAGCGGGGAAGGCTGCCAGGTGCGAGTGGCGGCCCCGTCCTCCTCCCCAAGTGCCGAGGCCGA GTACTGGCGCATCCGAGCCATGGCCCAGCAGGTGTTTATGCTGGACACCCAGTGCTCACCAAAGACACCA AACAACTTTGACCACGCTCAGTCCTGCCAGCTCATTATTGAGCTGCCTCCTGATGAAAAACCAAATGGAC ACACCAAGAAAAGCGTGTCTTTCAGGGAAATTGTGGTGAGCCTGCTGTCTCATCAGGTGTTACTCCAGAA CTTATATGACATCTTGTTAGAAGAGTTTGTCAAAGGCCCCTCTCCTGGAGAGGAAAAGACGATACAAGTG CCAGAAGCCAAGCTGGCTGGCTTCCTCAGATACATCTCTATGCAGAACTTGGCAGTCATATTCGACCTGC TGCTGGACTCTTATAGGACTGCCAGGGAGTTTGACACCAGCCCCGGGCTGAAGTGCCTGCTGAAGAAAGT GTCTGGCATCGGGGGCGCCGCCAACCTCTACCGCCAGTCTGCGATGAGCTTTAACATTTATTTCCACGCC CTGGTGTGTGCTGTTCTCACCAATCAAGAAACCATCACGGCCGAGCAAGTGAAGAAGGTCCTTTTTGAGG ACGACGAGAGAAGCACGGATTCTTCCCAGCAGTGTTCATCTGAGGATGAAGACATCTTTGAGGAAACCGC CCAGGTCAGCCCCCCGAGAGGCAAGGAGAAGAGACAGTGGCGGGCACGGATGCCCTTGCTCAGCGTCCAG CCTGTCAGCAACGCAGATTGGGTGTGGCTGGTCAAGAGGCTGCACAAGCTGTGCATGGAACTGTGCAACA ACTACATCCAGATGCACTTGGACCTGGAGAACTGTATGGAGGAGCCTCCCATCTTCAAGGGCGACCCGTT CTTCATCCTGCCCTCCTTCCAGTCCGAGTCATCCACCCCATCCACCGGGGGCTTCTCTGGGAAAGAAACC CCTTCCGAGGATGACAGAAGCCAGTCCCGGGAGCACATGGGCGAGTCCCTGAGCCTGAAGGCCGGTGGTG GGGACCTGCTGCTGCCCCCCAGCCCCAAAGTGGAGAAGAAGGATCCCAGCCGGAAGAAGGAGTGGTGGGA GAATGCGGGGAACAAAATCTACACCATGGCAGCCGACAAGACCATTTCAAAGTTGATGACCGAATACAAA AAGAGGAAACAGCAGCACAACCTGTCCGCGTTCCCCAAAGAGGTCAAAGTGGAGAAGAAAGGAGAGCCAC TGGGTCCCAGGGGCCAGGACTCCCCGCTGCTTCAGCGTCCCCAGCACTTGATGGACCAAGGGCAAATGCG GCATTCCTTCAGCGCAGGCCCCGAGCTGCTGCGACAGGACAAGAGGCCCCGCTCAGGCTCCACCGGGAGC TCCCTCAGTGTCTCGGTGAGAGACGCAGAAGCACAGATCCAGGCATGGACCAACATGGTGCTAACAGTTC TCAATCAGATTCAGATTCTCCCAGACCAGACCTTCACGGCCCTCCAGCCCGCAGTGTTCCCGTGCATCAG TCAGCTGACCTGTCACGTGACCGACATCAGAGTTCGCCAGGCTGTGAGGGAGTGGCTGGGCAGGGTGGGC CGTGTCTATGACATCATTGTGTAG
Translation (2177 aa): MEEILRKLQKEASGSKYKAIKESCTWALETLGGLDTIVKIPPHVLREKCLLPLQLALESKNVKLAQHALA GMQKLLSEERFVSMETDSDEKQLLNQILNAVKVTPSLNEDLQVEVMKVLLCITYTPTFDLNGSAVLKIAE VCIETYISSCHQRSINTAVRATLSQMLSDLTLQLRQRQENTIIENPDVPQDFGNQGSTVESLCDDVVSVL TVLCEKLQAAINDSQQLQLLYLECILSVLSSSSSSMHLHRRFTDLIWKNLCPALIVILGNPIHDKTITSA HTSSTSTSLESDSASPGVSDHGRGSGCSCTAPALSGPVARTIYYIAAELVRLVGSVDSMKPVLQSLYHRV LLYPPPQHRVEAIKIMKEILGSPQRLCDLAGPSSTESESRKRSISKRKSHLDLLKLIMDGMTEACIKGGI EACYAAVSCVCTLLGALDELSQGKGLSEGQVQLLLLRLEELKDGAEWSRDSMEINEADFRWQRRVLSSEH TPWESGNERSLDISISVTTDTGQTTLEGELGQTTPEDHSGNHKNSLKSPAIPEGKETLSKVLETEAVDQP DVVQRSHTVPYPDITNFLSVDCRTRSYGSRYSESNFSVDDQDLSRTEFDSCDQYSMAAEKDSGRSDVSDI GSDNCSLADEEQTPRDCLGHRSLRTAALSLKLLKNQEADQHSARLFIQSLEGLLPRLLSLSNVEEVDTAL QNFASTFCSGMMHSPGFDGNSSLSFQMLMNADSLYTAAHCALLLNLKLSHGDYYRKRPTLAPGVMKDFMK QVQTSGVLMVFSQAWIEELYHQVLDRNMLGEAGYWGSPEDNSLPLITMLTDIDGLESSAIGGQLMASAAT ESPFAQSRRIDDSTVAGVAFARYILVGCWKNLIDTLSTPLTGRMAGSSKGLAFILGAEGIKEQNQKERDA ICMSLDGLRKAARLSCALGVAANCASALAQMAAASCVQEEKEEREAQEPSDAITQVKLKVEQKLEQIGKV QGVWLHTAHVLCMEAILSVGLEMGSHNPDCWPHVFRVCEYVGTLEHNHFSDGASQPPLTISQPQKATGSA GLLGDPECEGSPPEHSPEQGRSLSTAPVVQPLSIQDLVREGSRGRASDFRGGSLMSGSSAAKVVLTLSTQ ADRLFEDATDKLNLMALGGFLYQLKKASQSQLFHSVTDTVDYSLAMPGEVKSTQDRKSALHLFRLGNAML RIVRSKARPLLHVMRCWSLVAPHLVEAACHKERHVSQKAVSFIHDILTEVLTDWNEPPHFHFNEALFRPF ERIMQLELCDEDVQDQVVTSIGELVEVCSTQIQSGWRPLFSALETVHGGNKSEMKEYLVGDYSMGKGQAP VFDVFEAFLNTDNIQVFANAATSYIMCLMKFVKGLGEVDCKEIGDCAPAPGAPSTDLCLPALDYLRRCSQ LLAKIYKMPLKPIFLSGRLAGLPRRLQEQSASSEDGIESVLSDFDDDTGLIEVWIILLEQLTAAVSNCPR QHQPPTLDLLFELLRDVTKTPGPGFGIYAVVHLLLPVMSVWLRRSHKDHSYWDMASANFKHAIGLSCELV VEHIQSFLHSDIRYESMINTMLKDLFELLVACVAKPTETISRVGCSCIRYVLVTAGPVFTEEMWRLACCA LQDAFSATLKPVKDLLGCFHSGTESFSGEGCQVRVAAPSSSPSAEAEYWRIRAMAQQVFMLDTQCSPKTP NNFDHAQSCQLIIELPPDEKPNGHTKKSVSFREIVVSLLSHQVLLQNLYDILLEEFVKGPSPGEEKTIQV PEAKLAGFLRYISMQNLAVIFDLLLDSYRTAREFDTSPGLKCLLKKVSGIGGAANLYRQSAMSFNIYFHA LVCAVLTNQETITAEQVKKVLFEDDERSTDSSQQCSSEDEDIFEETAQVSPPRGKEKRQWRARMPLLSVQ PVSNADWVWLVKRLHKLCMELCNNYIQMHLDLENCMEEPPIFKGDPFFILPSFQSESSTPSTGGFSGKET PSEDDRSQSREHMGESLSLKAGGGDLLLPPSPKVEKKDPSRKKEWWENAGNKIYTMAADKTISKLMTEYK KRKQQHNLSAFPKEVKVEKKGEPLGPRGQDSPLLQRPQHLMDQGQMRHSFSAGPELLRQDKRPRSGSTGS SLSVSVRDAEAQIQAWTNMVLTVLNQIQILPDQTFTALQPAVFPCISQLTCHVTDIRVRQAVREWLGRVG RVYDIIV
|