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Report for CCDS11159.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11159.2 Public Homo sapiens 17 ADPRM 24 110 108 CCDS HistoryNCBI Gene:56985Re-query CCDS DB by CCDS ID:11159.2See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 11159.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000379774.5 ENSP00000369099.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000379774.5Link to Ensembl Protein Viewer:ENSP00000369099.4Re-query CCDS DB by Nucleotide ID:ENST00000379774Re-query CCDS DB by Protein ID:ENSP00000369099
Original member Current member NCBI NM_020233.5 NP_064618.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020233.5Link to Protein Sequence:NP_064618.3Re-query CCDS DB by Nucleotide ID:NM_020233Re-query CCDS DB by Protein ID:NP_064618Link to BLAST:NP_064618.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064618.3 342 Q3LIE5-1 342 100% 0 0

Chromosomal Locations for CCDS 11159.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 10704927 10705527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 10706438 10706554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 10710834 10711144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1029 nt):
ATGGATGATAAACCCAATCCTGAAGCCCTAAGTGACAGTTCAGAGCGTCTTTTCTCCTTTGGCGTCATCG
CAGATGTTCAATTTGCAGACTTAGAAGATGGCTTTAATTTCCAAGGAACCAGGCGGCGATACTACAGACA
TAGTCTTCTTCACTTACAGGGTGCCATTGAAGACTGGAATAATGAAAGCAGCATGCCCTGTTGTGTCCTT
CAGCTTGGAGATATCATCGATGGATATAATGCACAGTATAATGCATCCAAAAAGTCCCTAGAACTTGTTA
TGGACATGTTCAAGAGGCTTAAAGTTCCAGTTCATCATACATGGGGAAACCATGAATTCTATAACTTCAG
TAGAGAGTATTTAACACACTCTAAACTTAACACTAAGTTTCTAGAAGATCAGATTGTACATCATCCTGAG
ACCATGCCTTCAGAAGATTATTATGCTTATCATTTTGTACCATTCCCTAAATTCCGGTTCATTTTACTTG
ATGCATATGACTTGAGTGTCTTGGGCGTGGATCAGTCTTCTCCAAAATACGAGCAGTGTATGAAGATATT
GAGGGAGCACAATCCAAATACGGAACTGAATAGTCCTCAAGGACTTTCTGAGCCCCAGTTTGTCCAGTTT
AATGGAGGATTCAGCCAAGAACAGCTAAACTGGTTGAATGAAGTGCTAACATTCTCTGACACAAACCAAG
AAAAGGTGGTGATTGTGAGCCATCTTCCCATTTACCCGGACGCCTCTGACAATGTGTGCCTGGCCTGGAA
CTACAGAGATGCCCTGGCAGTCATTTGGTCTCATGAGTGTGTGGTGTGTTTCTTTGCTGGTCACACCCAT
GATGGTGGCTACTCTGAGGATCCTTTTGGTGTATACCACGTCAACCTAGAAGGAGTTATTGAAACAGCTC
CAGACAGCCAAGCCTTTGGCACAGTTCATGTCTATCCTGACAAAATGATGTTGAAAGGGAGAGGCAGAGT
TCCAGATAGAATTATGAATTACAAGAAAGAAAGAGCCTTCCATTGTTAG

Translation (342 aa):
MDDKPNPEALSDSSERLFSFGVIADVQFADLEDGFNFQGTRRRYYRHSLLHLQGAIEDWNNESSMPCCVL
QLGDIIDGYNAQYNASKKSLELVMDMFKRLKVPVHHTWGNHEFYNFSREYLTHSKLNTKFLEDQIVHHPE
TMPSEDYYAYHFVPFPKFRFILLDAYDLSVLGVDQSSPKYEQCMKILREHNPNTELNSPQGLSEPQFVQF
NGGFSQEQLNWLNEVLTFSDTNQEKVVIVSHLPIYPDASDNVCLAWNYRDALAVIWSHECVVCFFAGHTH
DGGYSEDPFGVYHVNLEGVIETAPDSQAFGTVHVYPDKMMLKGRGRVPDRIMNYKKERAFHC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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