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Report for CCDS10241.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10241.2 Public Homo sapiens 15 PARP6 24 110 108 CCDS HistoryNCBI Gene:56965Re-query CCDS DB by CCDS ID:10241.2See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10241.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000287196.13 ENSP00000287196.9 Accepted alive Link to Ensembl Transcript Viewer:ENST00000287196.13Link to Ensembl Protein Viewer:ENSP00000287196.9Re-query CCDS DB by Nucleotide ID:ENST00000287196Re-query CCDS DB by Protein ID:ENSP00000287196
Original member Current member EBI ENST00000569795.6 ENSP00000456348.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000569795.6Link to Ensembl Protein Viewer:ENSP00000456348.1Re-query CCDS DB by Nucleotide ID:ENST00000569795Re-query CCDS DB by Protein ID:ENSP00000456348
Original member Current member NCBI NM_001323522.2 NP_001310451.1 Accepted alive Link to Nucleotide Sequence:NM_001323522.2Link to Protein Sequence:NP_001310451.1Re-query CCDS DB by Nucleotide ID:NM_001323522Re-query CCDS DB by Protein ID:NP_001310451Link to BLAST:NP_001310451.1
Original member Current member NCBI NM_001323532.2 NP_001310461.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001323532.2Link to Protein Sequence:NP_001310461.1Re-query CCDS DB by Nucleotide ID:NM_001323532Re-query CCDS DB by Protein ID:NP_001310461Link to BLAST:NP_001310461.1
Original member Current member NCBI NM_020214.4 NP_064599.2 Accepted alive Link to Nucleotide Sequence:NM_020214.4Link to Protein Sequence:NP_064599.2Re-query CCDS DB by Nucleotide ID:NM_020214Re-query CCDS DB by Protein ID:NP_064599Link to BLAST:NP_064599.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001310451.1 630 Q2NL67-1 630 100% 0 0
NP_001310461.1 630 Q2NL67-1 630 100% 0 0
NP_064599.2 630 Q2NL67-1 630 100% 0 0

Chromosomal Locations for CCDS 10241.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 72241455 72241557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72241901 72241985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72242157 72242220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72242620 72242699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72249245 72249314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72250020 72250092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72250845 72250954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72251207 72251255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72253437 72253504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72254455 72254520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72256465 72256590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72257348 72257440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72258037 72258132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72259608 72259661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72260478 72260688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72261558 72261707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72264555 72264621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72265081 72265171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72265413 72265473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72265897 72265991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72266745 72266822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72267475 72267477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1893 nt):
ATGGACATCAAAGGCCAGTTCTGGAATGATGACGACTCGGAGGGAGATAATGAATCAGAGGAATTTCTCT
ATGGCGTTCAGGGGAGCTGTGCAGCTGACCTGTATCGACACCCACAGCTTGATGCAGACATTGAAGCCGT
GAAGGAGATCTACAGTGAGAACTCTGTATCCATCAGAGAATATGGAACTATCGATGACGTGGACATTGAC
CTCCACATCAACATCAGCTTCCTCGATGAGGAAGTCTCTACAGCCTGGAAGGTCCTCCGGACAGAACCTA
TTGTGTTGAGGCTGCGATTTTCTCTCTCCCAGTACCTAGATGGACCAGAACCATCCATTGAGGTTTTCCA
GCCATCAAATAAGGAAGGATTTGGGCTGGGTCTTCAGTTGAAAAAGATCCTGGGTATGTTTACATCCCAA
CAATGGAAACATCTGAGCAATGATTTCTTGAAGACCCAGCAGGAGAAGAGGCACAGTTGGTTCAAGGCAA
GTGGTACCATCAAGAAGTTCCGAGCTGGCCTCAGCATCTTTTCACCCATCCCCAAGTCTCCCAGTTTCCC
TATCATACAGGACTCCATGCTGAAAGGCAAACTAGGTGTACCAGAGCTTCGGGTTGGGCGCCTCATGAAC
CGTTCCATCTCCTGTACCATGAAGAACCCCAAAGTGGAAGTGTTTGGCTACCCTCCCAGCCCCCAGGCAG
GTCTCCTGTGCCCTCAGCACGTGGGCCTCCCTCCCCCAGCACGGACCTCTCCTTTGGTCAGTGGTCACTG
CAAGAACATTCCCACTCTGGAGTATGGATTCCTCGTTCAGATCATGAAGTATGCAGAACAGAGGATTCCA
ACATTGAATGAGTACTGTGTGGTGTGTGATGAGCAGCATGTCTTCCAAAATGGATCTATGCTGAAGCCAG
CTGTCTGTACTCGTGAACTATGCGTTTTCTCCTTCTACACACTGGGCGTCATGTCTGGAGCTGCAGAGGA
GGTGGCCACTGGAGCAGAGGTGGTGGATCTGCTGGTGGCCATGTGTAGGGCAGCTTTAGAGTCCCCTAGA
AAGAGCATCATCTTTGAGCCTTATCCCTCTGTGGTGGACCCCACTGATCCCAAGACTCTGGCCTTTAACC
CTAAGAAGAAGAATTATGAGCGGCTTCAGAAAGCTCTGGATAGTGTGATGTCTATTCGGGAGATGACCCA
GGGCTCATATTTGGAAATCAAGAAACAGATGGACAAGTTGGATCCCCTGGCCCATCCTCTCCTGCAGTGG
ATCATCTCTAGCAACAGGTCACACATTGTCAAACTACCTCTCAGCAGGCTGAAGTTCATGCACACCTCAC
ACCAGTTCCTCCTGCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCCGGACCGCCAAGAAGCTCTATGG
CAGCACCTTTGCCTTCCATGGGTCCCACATTGAGAACTGGCATTCGATCCTGCGCAATGGGCTGGTCAAT
GCATCCTACACCAAACTGCAGCTGCATGGAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCCATCTCCA
GTATTTCCTTTGGATACTCAGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCA
GAGATACAACAGGATGAATACCATCCCCCAGACCCGATCCATTCAGTCACGGTTCCTGCAGAGTCGGAAT
CTAAACTGTATAGCACTTTGTGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGT
GCCCTGTGTCCGACCATGTCTGCACAAGATTCTTCTTTGTATATGAGGATGGTCAGGTGGGCGATGCCAA
CATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTTTACACAAAC
TGA

Translation (630 aa):
MDIKGQFWNDDDSEGDNESEEFLYGVQGSCAADLYRHPQLDADIEAVKEIYSENSVSIREYGTIDDVDID
LHINISFLDEEVSTAWKVLRTEPIVLRLRFSLSQYLDGPEPSIEVFQPSNKEGFGLGLQLKKILGMFTSQ
QWKHLSNDFLKTQQEKRHSWFKASGTIKKFRAGLSIFSPIPKSPSFPIIQDSMLKGKLGVPELRVGRLMN
RSISCTMKNPKVEVFGYPPSPQAGLLCPQHVGLPPPARTSPLVSGHCKNIPTLEYGFLVQIMKYAEQRIP
TLNEYCVVCDEQHVFQNGSMLKPAVCTRELCVFSFYTLGVMSGAAEEVATGAEVVDLLVAMCRAALESPR
KSIIFEPYPSVVDPTDPKTLAFNPKKKNYERLQKALDSVMSIREMTQGSYLEIKKQMDKLDPLAHPLLQW
IISSNRSHIVKLPLSRLKFMHTSHQFLLLSSPPAKEARFRTAKKLYGSTFAFHGSHIENWHSILRNGLVN
ASYTKLQLHGAAYGKGIYLSPISSISFGYSGMGKGQHRMPSKDELVQRYNRMNTIPQTRSIQSRFLQSRN
LNCIALCEVITSKDLQKHGNIWVCPVSDHVCTRFFFVYEDGQVGDANINTQDPKIQKEIMRVIGTQVYTN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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