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Report for CCDS33844.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33844.1 Public Homo sapiens 3 SLC41A3 24 110 108 CCDS HistoryNCBI Gene:54946Re-query CCDS DB by CCDS ID:33844.1Re-query CCDS DB by GeneID:54946See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33844.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000383598.6 ENSP00000373092.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000383598.6Link to Ensembl Protein Viewer:ENSP00000373092.2Re-query CCDS DB by Nucleotide ID:ENST00000383598Re-query CCDS DB by Protein ID:ENSP00000373092
Original member Current member NCBI NM_001008487.2 NP_001008487.1 Accepted alive Link to Nucleotide Sequence:NM_001008487.2Link to Protein Sequence:NP_001008487.1Re-query CCDS DB by Nucleotide ID:NM_001008487Re-query CCDS DB by Protein ID:NP_001008487Link to BLAST:NP_001008487.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001008487.1 461 Q96GZ6-7 461 100% 0 0

Chromosomal Locations for CCDS 33844.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 126007016 126007225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126008732 126008880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126012615 126012749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126015494 126015573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126016731 126016875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126022786 126022932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126026335 126026479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126033607 126033678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126050943 126051050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126056358 126056552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1386 nt):
ATGGTGGTCACCCAGCTGAATCTGGAGTTTTGCTTTCAGGGCAAGAAGCTGCGAGGCTTCAGCTGTGAGC
TTACCCGGTCCCCACATGGGGTCTTGCCTGAATCTTTCTTCACCATCATGTGCCAGGTCGTGGTGCCCAT
TCTGCTGTCCGGCTTGTGCATGATGACAGCCGGCCTGGTGATGAACACCATTCAACACTGGCCTGTGTTT
GTGGAGGTGAAAGACCTTTTGACATTGGTGCCGCCCCTGGTGGGCCTGAAGGGGAACCTGGAGATGACAC
TGGCATCCAGACTCTCCACAGCTGCCAACACTGGACAAATTGATGACCCCCAGGAGCAGCACAGAGTCAT
CAGCAGCAACCTGGCCCTCATCCAGGTGCAGGCCACTGTCGTGGGGCTCTTGGCTGCTGTGGCTGCGCTG
CTGTTGGGCGTGGTGTCTCGAGAGGAAGTGGATGTCGCCAAGGTGGAGTTGCTGTGTGCCAGCAGTGTCC
TCACTGCCTTCCTTGCAGCCTTTGCCCTGGGGGTGCTGATGGTCTGTATAGTGATTGGTGCTCGAAAGCT
CGGGGTCAACCCAGACAACATTGCCACGCCCATTGCAGCCAGCCTGGGAGACCTCATCACACTGTCCATT
CTGGCTTTGGTTAGCAGCTTCTTCTACAGACACAAAGATAGTCGGTATCTGACGCCGCTGGTCTGCCTCA
GCTTTGCGGCTCTGACCCCAGTGTGGGTCCTCATTGCCAAGCAGAGCCCACCCATCGTGAAGATCCTGAA
GTTTGGCTGGTTCCCAATCATCCTGGCCATGGTCATCAGCAGTTTCGGAGGACTCATCTTGAGCAAAACC
GTTTCTAAACAGCAGTACAAAGGCATGGCGATATTTACCCCCGTCATATGTGGTGTTGGTGGCAATCTGG
TGGCCATTCAGACCAGCCGAATCTCAACCTACCTGCACATGTGGAGTGCACCTGGCGTCCTGCCCCTCCA
GATGAAGAAATTCTGGCCCAACCCGTGTTCTACTTTCTGCACGTCAGAAATCAATTCCATGTCAGCTCGA
GTCCTGCTCTTGCTGGTGGTCCCAGGCCATCTGATTTTCTTCTACATCATCTACCTGGTGGAGGGTCAGT
CAGTCATAAACAGCCAGACCTTTGTGGTGCTCTACCTGCTGGCAGGCCTGATCCAGGTGACAATCCTGCT
GTACCTCGCAGAAGTGATGGTTCGGCTGACTTGGCACCAGGCCCTGGATCCTGACAACCACTGCATCCCC
TACCTTACAGGGCTGGGGGACCTGCTCGGTACTGGCCTCCTGGCACTCTGCTTTTTCACTGACTGGCTAC
TGAAGAGCAAGGCAGAGCTGGGTGGCATCTCAGAACTGGCATCTGGACCTCCCTAA

Translation (461 aa):
MVVTQLNLEFCFQGKKLRGFSCELTRSPHGVLPESFFTIMCQVVVPILLSGLCMMTAGLVMNTIQHWPVF
VEVKDLLTLVPPLVGLKGNLEMTLASRLSTAANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAAL
LLGVVSREEVDVAKVELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSI
LALVSSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVISSFGGLILSKT
VSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWPNPCSTFCTSEINSMSAR
VLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQVTILLYLAEVMVRLTWHQALDPDNHCIP
YLTGLGDLLGTGLLALCFFTDWLLKSKAELGGISELASGPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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